Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 1.0e-17 92.4 49 100.0
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 5.8e-13 76.6 49 83.7
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 9.8e-13 75.9 46 84.8
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 9.8e-13 75.9 44 86.4
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 1.3e-12 75.5 49 85.7
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 2.2e-12 74.7 43 88.4
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 3.7e-12 73.9 49 77.6
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 4.9e-12 73.6 49 79.6
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.9e-11 71.6 48 81.2
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 1.9e-11 71.6 46 80.4
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 1.2e-10 68.9 51 74.5
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 1.6e-10 68.6 41 82.9
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 2.0e-10 68.2 49 71.4
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 2.7e-10 67.8 45 73.3
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 3.5e-10 67.4 50 78.0
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 4.6e-10 67.0 48 68.8
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.0e-09 65.9 52 69.2
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 3.9e-09 63.9 48 64.6
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 6.6e-09 63.2 46 67.4
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 6.6e-09 63.2 46 67.4
Lalb_Chr12g0209641 Lupinus albus HOM05D009126 ORTHO05D011285 5.6e-08 60.1 40 75.0
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 7.3e-08 59.7 46 65.2
Oeu035754.1 Olea europaea HOM05D009126 ORTHO05D011285 9.5e-08 59.3 47 59.6
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 9.5e-08 59.3 46 63.0
Oeu035861.2 Olea europaea HOM05D009126 ORTHO05D011285 1.6e-07 58.5 44 61.4
TAR625G1075 Trochodendron aralioides HOM05D009126 ORTHO05D011285 1.6e-07 58.5 34 82.4
COL.COLO4_07461 Corchorus olitorius HOM05D009126 ORTHO05D011285 2.1e-07 58.2 37 75.7
Potri.005G255701 Populus trichocarpa HOM05D009126 ORTHO05D011285 2.1e-07 58.2 45 62.2
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 2.8e-07 57.8 43 65.1
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 4.7e-07 57.0 42 61.9
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 4.7e-07 57.0 42 61.9
TAR381G1079 Trochodendron aralioides HOM05D009126 ORTHO05D011285 6.2e-07 56.6 34 79.4
RcHm_v2.0_Chr4g0399731 Rosa chinensis HOM05D009126 ORTHO05D011285 6.8e-06 53.1 46 63.0


User provided reference genes

Program Settings