Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 3.5e-65 251.5 130 100.0
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 3.2e-26 122.1 129 62.8
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 3.8e-11 72.0 123 41.5
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.1e-10 70.5 129 38.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 5.4e-10 68.2 143 42.7
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.2e-09 67.0 136 42.6
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 2.1e-09 66.2 125 45.6
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 2.7e-09 65.9 125 40.0
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.7e-09 65.9 125 40.0
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.6e-09 65.1 125 40.0
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 7.8e-09 64.3 115 39.1
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 7.8e-09 64.3 125 37.6
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 7.8e-09 64.3 122 36.1
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 1.3e-08 63.5 132 36.4
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.3e-08 63.5 133 37.6
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-08 63.2 124 38.7
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.3e-08 62.8 120 38.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.3e-08 62.8 137 37.2
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 3.0e-08 62.4 132 37.9
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 3.0e-08 62.4 121 38.0
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.9e-08 62.0 124 41.9
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 3.9e-08 62.0 133 37.6
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 6.6e-08 61.2 140 39.3
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 6.6e-08 61.2 118 36.4
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.1e-07 60.5 127 35.4
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 1.1e-07 60.5 140 37.9
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.5e-07 60.1 145 34.5
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 1.5e-07 60.1 126 38.1
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.5e-07 60.1 125 36.8
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 2.5e-07 59.3 133 36.8
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.3e-07 58.5 114 39.5
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.6e-07 58.2 114 39.5
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 5.6e-07 58.2 132 36.4
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 5.6e-07 58.2 118 36.4
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 9.6e-07 57.4 124 38.7
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 9.6e-07 57.4 124 38.7
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 9.6e-07 57.4 128 37.5
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 9.6e-07 57.4 107 41.1
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 2.1e-06 56.2 119 37.8
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 3.6e-06 55.5 131 35.9
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 3.6e-06 55.5 111 40.5
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.8e-06 55.1 119 37.0
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.8e-06 55.1 119 37.8
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 4.8e-06 55.1 121 36.4
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 6.2e-06 54.7 123 36.6
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 8.1e-06 54.3 120 37.5
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 8.1e-06 54.3 123 39.8
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.1e-06 54.3 144 34.0


User provided reference genes

Program Settings