Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.4e-164 581.6 303 100.0
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.8e-101 373.2 295 70.5
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 3.2e-98 362.5 305 68.2
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 7.8e-92 341.3 306 67.3
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 3.3e-82 309.3 313 61.7
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 5.1e-67 258.8 303 54.1
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.3e-66 256.1 321 52.6
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.2e-65 254.2 321 53.0
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.8e-64 250.4 300 56.0
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 5.8e-63 245.4 308 53.9
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 2.4e-61 240.0 306 53.3
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.1e-61 239.2 292 55.1
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-60 237.3 315 53.0
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.0e-59 234.6 312 51.3
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.1e-59 232.3 307 48.9
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.1e-58 231.1 307 48.5
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 9.6e-58 228.0 357 45.1
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 2.1e-57 226.9 308 49.0
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 2.0e-55 220.3 301 49.2
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 2.6e-55 219.9 357 44.3
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 4.4e-55 219.2 295 52.2
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.4e-55 219.2 321 46.7
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 4.4e-55 219.2 285 49.8
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.8e-55 218.8 283 51.6
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.6e-55 218.4 283 51.6
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.9e-54 215.7 286 52.1
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 6.4e-54 215.3 347 45.0
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 6.4e-54 215.3 320 49.1
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 8.4e-54 214.9 299 52.2
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 4.2e-53 212.6 307 47.6
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.2e-53 212.6 307 47.6
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 4.2e-53 212.6 292 51.4
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 4.2e-53 212.6 339 44.8
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.4e-53 212.2 307 47.6
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 1.0e-51 208.0 304 47.7
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 1.1e-50 204.5 180 65.6
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 9.6e-50 201.4 308 47.1
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 1.3e-49 201.1 286 50.0
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 6.2e-49 198.7 297 46.5
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 6.2e-49 198.7 255 50.6
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 4.0e-48 196.1 306 46.7
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.5e-47 194.1 320 44.1
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.6e-47 193.4 307 46.6
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 6.4e-46 188.7 303 43.6
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 8.4e-46 188.3 329 44.4
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.4e-46 188.3 284 49.6
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 1.1e-45 188.0 296 45.9
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.9e-45 187.2 284 49.3
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 2.4e-45 186.8 293 46.8
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 3.2e-45 186.4 301 44.9
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 7.1e-45 185.3 305 44.6
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 7.1e-45 185.3 334 41.3
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 1.6e-44 184.1 255 49.8
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 1.6e-44 184.1 255 49.8
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 3.5e-44 183.0 301 46.8
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 7.9e-44 181.8 275 48.4
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.3e-43 180.3 311 46.9
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 3.9e-43 179.5 280 46.4
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.5e-42 176.8 260 46.2
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 4.3e-42 176.0 284 45.4
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.6e-41 174.1 296 43.9
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 1.6e-41 174.1 296 45.9
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 2.1e-41 173.7 297 43.1
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 2.8e-41 173.3 302 43.0
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 8.1e-41 171.8 334 40.4
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.1e-40 171.4 259 48.3
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 5.3e-40 169.1 314 41.7
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 9.0e-40 168.3 256 48.4
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 9.0e-40 168.3 301 43.9
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.2e-39 167.9 250 48.8
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 7.6e-39 165.2 316 40.8
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 7.6e-39 165.2 316 40.8
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 7.6e-39 165.2 316 40.8
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 9.9e-39 164.9 161 63.4
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 2.2e-38 163.7 317 41.3
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.1e-37 161.4 220 54.1
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 1.1e-37 161.4 314 43.3
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.4e-37 161.0 292 39.4
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 3.5e-36 156.4 250 46.8
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.3e-35 154.5 318 39.6
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 2.3e-35 153.7 162 61.1
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 6.7e-35 152.1 296 42.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.5e-34 150.2 337 36.2
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 5.6e-34 149.1 283 41.3
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 8.2e-33 145.2 207 50.2
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.5e-31 141.0 153 54.9
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 4.5e-31 139.4 237 45.1
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 4.9e-30 136.0 244 43.0
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.1e-29 134.8 321 36.4
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.4e-29 134.4 133 62.4
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.5e-29 133.7 235 44.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.2e-29 133.3 255 43.5
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 3.2e-29 133.3 225 42.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 2.1e-28 130.6 261 41.4
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.1e-28 130.6 210 47.1
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.1e-28 130.6 322 36.0
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.7e-28 130.2 155 54.8
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 6.0e-28 129.0 217 45.6
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.3e-27 127.9 221 43.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 5.1e-27 125.9 254 40.2
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 6.7e-27 125.6 303 37.6
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 8.7e-27 125.2 302 37.7
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 1.9e-26 124.0 311 37.0
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.9e-26 124.0 185 51.4
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 7.4e-26 122.1 218 46.3
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 2.8e-25 120.2 279 37.3
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.8e-24 117.5 259 37.5
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 5.3e-24 115.9 214 44.4
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.3e-24 115.9 149 51.7
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 1.7e-22 110.9 255 36.9
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 2.9e-22 110.2 314 36.0
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 8.5e-22 108.6 321 33.3
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 6.1e-20 102.4 87 65.5
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.0e-19 101.7 191 41.4
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 1.4e-19 101.3 204 41.2
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.4e-16 90.5 61 73.8
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-14 84.3 61 70.5
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.0e-14 82.8 54 75.9
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.9e-13 80.9 185 37.8
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 1.5e-07 61.2 151 37.7
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 1.0e-06 58.5 42 69.0
Eucgr.C01488 Eucalyptus grandis HOM05D000141 ORTHO05D000780 8.5e-06 55.5 83 38.6


User provided reference genes

Program Settings