Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 3.4e-274 948.0 573 100.0
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.2e-178 630.6 588 71.1
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 1.5e-173 613.6 599 69.1
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.1e-142 511.1 607 60.6
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 5.9e-133 478.8 607 53.0
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.7e-127 460.7 500 58.0
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 1.0e-124 451.4 664 47.7
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 8.2e-119 431.8 553 54.2
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.4e-118 431.0 637 47.9
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 3.8e-116 422.9 573 50.8
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 9.4e-115 418.3 561 48.8
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 3.4e-112 409.8 569 49.2
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 2.2e-111 407.1 567 48.9
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 1.1e-110 404.8 573 52.0
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 2.4e-110 403.7 598 47.8
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 7.0e-110 402.1 570 47.4
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.0e-109 400.6 629 47.9
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 7.7e-109 398.7 562 48.4
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.7e-109 398.7 562 48.4
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 7.7e-109 398.7 584 49.1
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.0e-108 398.3 568 50.4
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 6.6e-108 395.6 630 45.2
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.9e-107 394.0 575 49.6
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.3e-107 393.3 569 52.0
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 2.8e-106 390.2 629 47.1
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 6.8e-105 385.6 626 43.6
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 7.5e-104 382.1 682 45.2
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.7e-103 380.9 638 44.4
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 4.9e-103 379.4 632 43.2
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 4.1e-102 376.3 360 59.2
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 4.1e-102 376.3 624 44.9
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 9.2e-102 375.2 569 47.5
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 2.7e-101 373.6 546 45.2
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.9e-101 372.5 540 48.7
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.7e-100 370.9 583 46.8
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.0e-100 369.4 571 47.6
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 8.6e-100 368.6 597 47.4
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.1e-99 368.2 586 46.8
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.1e-99 368.2 582 46.9
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 1.1e-99 368.2 601 46.3
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.2e-98 364.8 622 41.5
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 2.8e-98 363.6 625 42.7
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 3.0e-97 360.1 598 41.6
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 9.8e-96 355.1 630 44.6
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.9e-95 353.6 648 44.4
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 3.7e-95 353.2 604 45.2
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 4.1e-94 349.7 614 41.0
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 6.0e-93 345.9 573 45.0
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 7.8e-93 345.5 581 44.9
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 8.6e-92 342.0 594 43.1
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 4.3e-91 339.7 642 41.9
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 5.6e-91 339.3 617 42.6
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 1.2e-90 338.2 573 44.0
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 3.6e-90 336.7 562 42.2
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 4.7e-90 336.3 356 56.7
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 8.0e-90 335.5 550 50.5
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 5.2e-89 332.8 574 44.9
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 3.4e-88 330.1 621 39.9
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 9.8e-88 328.6 560 42.9
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 2.9e-87 327.0 586 42.5
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 4.9e-87 326.2 567 43.2
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 8.3e-87 325.5 564 43.6
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.4e-86 324.7 579 41.8
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.2e-85 321.6 567 40.6
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 2.3e-84 317.4 564 43.1
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.5e-83 313.9 354 51.4
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 4.3e-83 313.2 560 40.2
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.4e-81 308.1 500 48.2
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 6.8e-81 305.8 606 39.8
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 7.5e-80 302.4 563 41.0
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 7.5e-80 302.4 563 41.0
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.3e-76 291.6 304 54.6
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 1.9e-75 287.7 601 41.4
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 2.5e-75 287.3 563 41.6
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 5.2e-73 279.6 344 49.4
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 8.9e-73 278.9 520 41.9
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.2e-69 268.5 563 40.3
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 3.4e-64 250.4 587 38.2
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.6e-61 241.5 433 43.2
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.5e-61 240.4 229 59.4
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 5.1e-60 236.5 512 42.6
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.1e-57 228.8 208 61.1
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 2.6e-48 197.6 565 31.7
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 5.5e-38 163.3 253 41.9
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 2.1e-37 161.4 257 43.6
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.3e-35 154.1 201 46.8
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.6e-32 144.4 336 39.6
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 5.9e-32 143.3 352 31.8
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.2e-29 135.6 525 26.5
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.4e-28 132.1 379 34.6
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.8e-26 124.4 358 28.5
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 1.7e-18 98.6 389 30.8
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 4.8e-18 97.1 133 45.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.7e-15 88.6 89 58.4
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.1e-14 85.9 70 67.1
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.6e-13 80.9 72 61.1
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 5.2e-12 77.0 80 58.8
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.5e-11 75.5 80 57.5
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.0e-11 75.1 103 48.5
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 7.4e-11 73.2 80 55.0
HPP92_019588 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.1e-09 67.8 144 40.3


User provided reference genes

Program Settings