Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 7.3e-104 380.6 193 100.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.6e-66 255.4 202 72.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 3.3e-64 248.8 202 71.8
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.6e-61 239.2 195 68.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.2e-57 224.9 183 71.0
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 5.5e-51 204.9 202 60.4
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 3.0e-49 199.1 202 57.4
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 2.4e-46 189.5 168 59.5
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.7e-44 183.3 184 56.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.7e-44 183.3 158 60.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 3.6e-42 175.6 184 58.2
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.0e-41 174.1 191 53.9
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 2.3e-41 172.9 206 50.0
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 5.2e-41 171.8 203 53.2
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 5.7e-40 168.3 152 65.8
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 2.2e-39 166.4 175 56.6
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 8.3e-39 164.5 188 53.7
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.1e-38 164.1 169 56.2
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.4e-38 163.7 186 54.8
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.1e-38 162.5 156 57.1
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.4e-38 161.8 197 51.3
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 9.1e-38 161.0 181 55.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.2e-37 160.6 187 55.1
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 2.0e-37 159.8 173 56.1
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.7e-37 159.5 196 52.0
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 4.5e-37 158.7 171 54.4
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 7.7e-37 157.9 183 53.0
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 7.7e-37 157.9 183 54.1
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 7.7e-37 157.9 180 56.7
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.0e-36 157.5 188 52.1
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.9e-36 156.0 159 57.2
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 5.0e-36 155.2 153 57.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 6.6e-36 154.8 181 50.8
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 6.6e-36 154.8 184 52.7
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 6.6e-36 154.8 184 52.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.1e-35 154.1 164 56.1
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 1.1e-35 154.1 150 58.0
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.1e-35 154.1 195 49.7
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.3e-35 152.5 182 50.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 3.3e-35 152.5 156 53.2
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 7.2e-35 151.4 184 51.6
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 9.5e-35 151.0 185 50.8
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 6.1e-34 148.3 211 46.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 6.1e-34 148.3 180 50.6
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 8.0e-34 147.9 181 48.1
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.3e-33 146.4 207 44.4
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 2.3e-33 146.4 155 55.5
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.0e-33 146.0 157 55.4
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.0e-33 145.6 213 45.1
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 4.0e-33 145.6 179 50.8
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 5.2e-33 145.2 169 51.5
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 8.9e-33 144.4 169 49.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.7e-31 140.2 208 44.7
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 2.8e-31 139.4 143 54.5
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 4.9e-31 138.7 150 54.7
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 6.3e-31 138.3 187 48.1
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 3.2e-30 136.0 147 52.4
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 3.2e-30 136.0 198 47.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 7.0e-30 134.8 171 45.6
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 1.2e-29 134.0 155 53.5
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.0e-28 131.0 168 47.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.7e-28 130.2 151 47.7
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.7e-28 130.2 179 48.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 2.9e-28 129.4 141 56.7
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 8.6e-28 127.9 136 52.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.5e-27 127.1 170 47.6
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.5e-27 127.1 133 57.1
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.9e-27 126.7 161 48.4
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 3.3e-27 125.9 150 50.0
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 4.3e-27 125.6 152 48.0
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 7.3e-27 124.8 155 51.0
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 9.5e-27 124.4 150 50.7
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.6e-26 123.6 157 46.5
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.6e-26 123.6 157 47.8
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 1.6e-26 123.6 178 42.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 2.8e-26 122.9 173 49.1
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.7e-26 122.1 157 47.1
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 4.7e-26 122.1 157 47.1
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 6.1e-26 121.7 158 46.2
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 6.1e-26 121.7 158 46.2
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.0e-25 120.9 157 48.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.0e-25 120.9 150 49.3
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 2.3e-25 119.8 136 52.9
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.3e-25 119.8 158 44.9
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 3.1e-25 119.4 158 45.6
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 4.0e-25 119.0 173 48.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 8.9e-25 117.9 192 44.8
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 8.9e-25 117.9 153 51.6
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.5e-24 117.1 151 43.7
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.0e-24 116.7 157 44.6
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 3.4e-24 115.9 154 44.8
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 5.8e-24 115.2 158 44.3
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 5.8e-24 115.2 158 44.3
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.3e-23 114.0 160 42.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.7e-23 113.6 146 48.6
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 4.9e-23 112.1 167 40.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.4e-22 109.8 183 45.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 3.2e-22 109.4 159 46.5
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 9.2e-22 107.8 129 53.5
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 7.8e-21 104.8 141 48.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.3e-20 104.0 127 52.0
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 1.7e-20 103.6 157 42.7
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.1e-19 100.9 146 47.3
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.6e-18 97.1 115 47.8
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 3.6e-18 95.9 116 51.7
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.6e-18 95.9 118 47.5
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 8.9e-17 91.3 81 58.0
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.6e-16 89.7 73 56.2
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.2e-07 60.1 89 43.8
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 4.9e-07 58.9 157 29.9


User provided reference genes

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