Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 5.7e-68 260.8 130 100.0
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.0e-53 213.4 129 79.8
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.4e-52 208.4 129 79.1
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 7.0e-50 200.7 132 75.8
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 2.7e-49 198.7 135 74.1
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 3.9e-48 194.9 120 80.0
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 8.6e-48 193.7 119 79.0
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.9e-47 192.6 122 77.0
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.9e-47 192.6 133 73.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 1.9e-47 192.6 120 80.8
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 3.3e-47 191.8 120 77.5
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 5.6e-47 191.0 120 76.7
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 7.3e-47 190.7 130 73.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 7.3e-47 190.7 119 78.2
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 7.3e-47 190.7 119 77.3
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 7.3e-47 190.7 136 71.3
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 7.3e-47 190.7 130 71.5
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 9.5e-47 190.3 119 77.3
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 9.5e-47 190.3 123 77.2
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.2e-46 189.9 122 76.2
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.2e-46 189.9 119 77.3
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.6e-46 189.5 130 73.1
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.6e-46 189.5 118 78.8
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 1.6e-46 189.5 120 78.3
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 3.6e-46 188.3 122 75.4
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 6.1e-46 187.6 119 77.3
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 8.0e-46 187.2 122 76.2
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.0e-46 187.2 120 77.5
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.0e-45 186.8 130 73.1
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.0e-45 186.8 122 76.2
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 1.4e-45 186.4 119 77.3
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.4e-45 186.4 124 71.0
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.4e-45 186.4 130 72.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 4.0e-45 184.9 119 75.6
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 6.8e-45 184.1 130 71.5
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 6.8e-45 184.1 117 76.9
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 6.8e-45 184.1 121 72.7
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 8.9e-45 183.7 130 66.9
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.5e-44 183.0 133 70.7
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 2.6e-44 182.2 122 72.1
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.6e-44 182.2 120 72.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 2.6e-44 182.2 120 73.3
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 3.4e-44 181.8 118 76.3
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.4e-44 181.8 118 78.0
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 7.5e-44 180.6 130 67.7
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.3e-43 179.9 112 80.4
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 2.2e-43 179.1 130 69.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.9e-43 177.9 141 65.2
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 1.2e-41 173.3 118 67.8
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.2e-41 173.3 125 69.6
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.0e-41 172.6 130 66.2
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.7e-41 172.2 157 60.5
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.0e-40 170.2 122 68.0
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.3e-40 169.1 122 63.9
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 3.0e-40 168.7 118 67.8
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.9e-40 168.3 116 67.2
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 5.0e-40 167.9 116 66.4
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 5.0e-40 167.9 116 67.2
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 5.0e-40 167.9 118 66.9
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 8.6e-40 167.2 118 66.1
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 8.6e-40 167.2 118 66.1
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 8.6e-40 167.2 118 66.1
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 8.6e-40 167.2 122 64.8
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.5e-39 166.4 116 66.4
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.9e-39 166.0 123 65.0
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 3.3e-39 165.2 109 73.4
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 4.3e-39 164.9 118 64.4
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 5.6e-39 164.5 99 77.8
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 5.6e-39 164.5 102 77.5
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 6.2e-38 161.0 130 60.8
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 6.2e-38 161.0 117 68.4
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.0e-38 160.6 105 76.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.1e-37 160.2 118 63.6
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 3.1e-37 158.7 123 65.9
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 3.1e-37 158.7 119 64.7
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 4.4e-36 154.8 127 58.3
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 4.4e-36 154.8 122 60.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 9.8e-36 153.7 124 62.1
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.2e-34 148.7 122 62.3
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 9.2e-34 147.1 130 60.0
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 6.6e-32 141.0 117 57.3
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.3e-29 132.5 114 58.8
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.9e-28 127.1 80 80.0
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 6.4e-27 124.4 77 77.9
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 7.1e-26 120.9 80 72.5
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 6.0e-25 117.9 120 49.2
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 7.8e-25 117.5 127 48.0
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.5e-23 113.2 86 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 4.7e-22 108.2 125 48.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.8e-19 98.6 85 62.4
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 6.4e-19 97.8 59 79.7
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 6.0e-17 91.3 110 45.5
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.8e-13 79.7 104 43.3
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 9.9e-12 73.9 85 48.2
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.4e-10 69.3 51 58.8
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 3.3e-07 58.9 92 42.4


User provided reference genes

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