Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.2e-158 563.1 288 100.0
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 2.5e-116 422.5 267 83.5
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 1.2e-110 403.7 252 85.7
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 1.6e-110 403.3 261 82.0
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 6.6e-109 397.9 267 76.8
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 8.7e-109 397.5 273 77.3
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 7.3e-108 394.4 281 73.3
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.4e-106 390.2 258 79.8
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.2e-105 387.1 284 73.6
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 1.4e-103 380.2 258 78.3
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 2.1e-102 376.3 254 78.0
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 2.7e-102 375.9 254 78.7
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 2.7e-102 375.9 259 79.2
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.7e-102 375.9 283 73.1
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 4.6e-102 375.2 258 77.5
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 8.7e-101 370.9 258 76.7
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.9e-100 369.8 258 74.4
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 2.5e-100 369.4 258 76.4
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 7.4e-100 367.9 254 76.0
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 7.4e-100 367.9 254 76.0
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.1e-99 366.3 259 78.4
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 3.6e-99 365.5 258 77.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 3.6e-99 365.5 254 77.2
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 3.6e-99 365.5 254 76.0
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 4.8e-99 365.2 255 77.6
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 4.8e-99 365.2 258 73.6
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 6.2e-99 364.8 252 75.4
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 8.1e-99 364.4 259 74.1
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 8.1e-99 364.4 283 71.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 8.1e-99 364.4 271 74.2
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.1e-98 364.0 252 75.4
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.4e-98 363.6 243 78.6
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 3.1e-98 362.5 252 77.4
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.3e-98 361.7 258 74.4
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.2e-97 360.5 259 76.8
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.6e-97 359.4 268 73.5
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 3.4e-97 359.0 252 73.8
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 1.3e-96 357.1 254 74.8
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 2.9e-96 355.9 253 77.5
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 2.9e-96 355.9 258 72.5
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 6.4e-96 354.8 258 73.6
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 6.4e-96 354.8 259 73.4
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 8.4e-96 354.4 261 71.6
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.1e-95 354.0 254 75.2
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.1e-95 354.0 258 73.3
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 1.1e-95 354.0 258 72.5
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 7.1e-95 351.3 259 71.8
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.2e-94 350.5 252 72.6
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.2e-94 350.5 259 72.6
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.6e-94 350.1 255 74.9
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.7e-94 349.4 258 73.3
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.7e-94 349.4 258 73.3
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.6e-94 348.6 258 73.3
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 4.6e-94 348.6 255 74.5
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 6.0e-94 348.2 258 72.9
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 6.0e-94 348.2 258 72.9
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 7.9e-94 347.8 253 72.3
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 1.8e-93 346.7 255 72.5
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 3.0e-93 345.9 258 72.5
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 1.9e-92 343.2 268 71.3
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 3.3e-92 342.4 281 65.8
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 7.4e-92 341.3 265 70.9
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 1.6e-91 340.1 280 65.7
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 2.1e-91 339.7 257 73.5
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 7.6e-89 331.3 255 71.0
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 2.5e-87 326.2 261 70.1
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 7.9e-86 321.2 263 68.1
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 2.3e-85 319.7 263 68.1
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 3.0e-85 319.3 271 66.4
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 3.0e-85 319.3 279 65.9
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 3.9e-85 318.9 264 64.4
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 6.7e-85 318.2 279 64.5
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.9e-84 316.6 269 65.8
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.5e-84 316.2 275 65.1
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 5.7e-84 315.1 267 68.2
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 6.3e-83 311.6 280 63.2
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 5.3e-82 308.5 301 60.8
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.6e-81 306.2 255 67.1
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 3.4e-81 305.8 255 65.1
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.0e-80 304.3 276 64.9
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.9e-80 302.8 255 65.5
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.9e-79 300.1 221 73.8
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 2.5e-79 299.7 258 67.8
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 7.2e-79 298.1 271 63.1
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 9.3e-79 297.7 262 64.1
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.6e-78 297.0 261 62.5
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-78 297.0 272 62.9
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 2.7e-78 296.2 264 65.5
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 2.7e-78 296.2 264 65.5
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 6.7e-77 291.6 264 63.3
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 1.5e-76 290.4 263 63.5
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 2.5e-76 289.7 257 61.9
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 2.5e-76 289.7 270 61.9
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 5.7e-76 288.5 263 63.9
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.3e-75 287.3 268 60.1
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 2.8e-75 286.2 270 61.5
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 3.7e-75 285.8 293 57.7
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 8.2e-75 284.6 264 60.2
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 2.0e-73 280.0 264 61.0
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 2.6e-73 279.6 265 59.2
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 3.4e-73 279.3 303 53.5
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 2.2e-72 276.6 265 58.9
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 5.0e-72 275.4 263 59.7
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 8.5e-72 274.6 258 60.9
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.7e-70 269.6 243 63.0
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 3.6e-70 269.2 261 60.5
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 3.0e-69 266.2 175 74.9
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 3.3e-68 262.7 228 65.4
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 4.8e-67 258.8 228 64.5
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 8.2e-67 258.1 275 58.9
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 1.3e-64 250.8 269 54.3
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 8.5e-64 248.1 221 63.8
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 8.0e-46 188.3 274 44.9
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.5e-44 184.1 204 51.0
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 5.0e-40 169.1 226 49.6
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 5.5e-39 165.6 201 46.3
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 6.8e-37 158.7 102 78.4
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 2.0e-36 157.1 244 41.4
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 2.2e-35 153.7 203 44.8
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.4e-34 151.0 103 72.8
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 6.1e-30 135.6 161 51.6
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.8e-29 134.0 197 41.1
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 6.8e-29 132.1 233 39.5
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 9.2e-26 121.7 109 65.1
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 6.4e-19 99.0 129 49.6
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 9.2e-18 95.1 81 64.2
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-10 71.2 107 43.0
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 2.8e-06 57.0 91 47.3


User provided reference genes

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