Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 6.0e-74 280.8 145 100.0
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 4.2e-35 151.8 147 65.3
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 1.2e-29 133.7 152 61.2
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 3.4e-29 132.1 155 58.1
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.9e-28 128.3 136 61.8
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 7.9e-26 120.9 149 50.3
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 2.3e-25 119.4 147 50.3
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 6.7e-25 117.9 146 51.4
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 3.7e-23 112.1 147 49.7
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 6.2e-23 111.3 140 50.7
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.4e-22 110.2 145 46.2
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 1.2e-21 107.1 135 46.7
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 4.5e-21 105.1 130 50.0
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 4.5e-21 105.1 146 48.6
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 7.6e-21 104.4 128 50.8
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 3.8e-20 102.1 128 51.6
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 6.5e-20 101.3 135 50.4
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.5e-19 99.4 141 48.9
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 3.2e-19 99.0 139 50.4
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.2e-19 99.0 141 48.9
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 3.2e-19 99.0 141 48.9
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 4.2e-19 98.6 79 68.4
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 5.5e-19 98.2 145 47.6
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 9.3e-19 97.4 142 46.5
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 1.2e-18 97.1 145 45.5
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 1.2e-18 97.1 78 66.7
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 2.1e-18 96.3 147 46.3
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 4.6e-18 95.1 137 46.0
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 1.3e-17 93.6 146 45.2
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 1.8e-17 93.2 109 52.3
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 6.7e-17 91.3 86 54.7
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 1.1e-16 90.5 154 39.0
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.1e-16 90.5 154 39.0
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 1.5e-16 90.1 142 42.3
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 3.3e-16 89.0 154 39.0
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.3e-16 88.6 150 40.7
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 4.3e-16 88.6 111 45.9
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 5.7e-16 88.2 146 44.5
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 5.7e-16 88.2 73 68.5
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 2.2e-15 86.3 126 46.8
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 3.7e-15 85.5 154 38.3
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 6.3e-15 84.7 120 45.0
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 2.4e-14 82.8 124 47.6
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 5.3e-14 81.6 79 62.0
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 5.3e-14 81.6 144 41.7
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.5e-13 80.1 70 64.3
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 2.0e-13 79.7 90 53.3
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.6e-13 79.3 99 45.5
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.4e-13 79.0 80 51.2
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 3.4e-13 79.0 139 40.3
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 4.5e-13 78.6 120 45.0
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 4.5e-13 78.6 151 41.1
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 5.9e-13 78.2 134 44.0
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 5.9e-13 78.2 61 63.9
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 7.7e-13 77.8 86 57.0
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 1.0e-12 77.4 70 51.4
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.3e-12 77.0 99 44.4
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 2.2e-12 76.3 121 40.5
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 2.2e-12 76.3 124 40.3
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 3.8e-12 75.5 76 55.3
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 3.8e-12 75.5 54 74.1
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 6.5e-12 74.7 92 43.5
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 8.5e-12 74.3 70 54.3
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 1.1e-11 73.9 112 41.1
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.1e-11 73.9 107 41.1
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 1.4e-11 73.6 157 38.2
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.4e-11 73.6 134 38.8
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 1.9e-11 73.2 115 44.3
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.5e-11 72.8 143 36.4
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 3.2e-11 72.4 99 46.5
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 5.5e-11 71.6 70 51.4
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 5.5e-11 71.6 83 49.4
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 7.2e-11 71.2 127 44.9
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 7.2e-11 71.2 107 46.7
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 7.2e-11 71.2 99 43.4
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 9.4e-11 70.9 67 61.2
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 9.4e-11 70.9 71 52.1
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 9.4e-11 70.9 70 51.4
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 9.4e-11 70.9 71 52.1
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 1.2e-10 70.5 72 54.2
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.2e-10 70.5 62 59.7
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 1.6e-10 70.1 70 51.4
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 1.6e-10 70.1 70 51.4
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 1.6e-10 70.1 112 42.0
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.1e-10 69.7 70 50.0
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 2.1e-10 69.7 70 50.0
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 2.1e-10 69.7 70 50.0
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 2.1e-10 69.7 97 41.2
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 2.7e-10 69.3 70 50.0
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 3.6e-10 68.9 67 50.7
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 4.6e-10 68.6 71 50.7
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 6.1e-10 68.2 60 56.7
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 6.1e-10 68.2 106 43.4
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 7.9e-10 67.8 82 54.9
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 1.4e-09 67.0 114 38.6
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 1.8e-09 66.6 91 45.1
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 1.8e-09 66.6 70 48.6
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 1.8e-09 66.6 114 39.5
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 1.8e-09 66.6 114 39.5
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 1.8e-09 66.6 114 39.5
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 2.3e-09 66.2 61 54.1
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 2.3e-09 66.2 110 38.2
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 3.0e-09 65.9 109 45.0
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 3.0e-09 65.9 67 47.8
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 3.9e-09 65.5 52 59.6
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 6.7e-09 64.7 62 56.5
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 6.7e-09 64.7 68 44.1
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 1.5e-08 63.5 70 44.3
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 2.0e-08 63.2 67 46.3
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 2.5e-08 62.8 103 39.8
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.5e-08 62.8 64 51.6
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 2.5e-08 62.8 78 46.2
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 3.3e-08 62.4 146 39.0
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 5.7e-08 61.6 71 45.1
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 5.7e-08 61.6 110 43.6
Sed0017392 Sechium edule HOM05D006547 ORTHO05D008112 5.7e-08 61.6 81 39.5
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 5.7e-08 61.6 96 39.6
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 1.3e-07 60.5 83 47.0
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 3.7e-07 58.9 73 39.7
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 4.8e-07 58.5 79 46.8
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 1.1e-06 57.4 73 39.7
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.1e-06 57.4 88 35.2
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.4e-06 57.0 69 46.4
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 2.4e-06 56.2 93 43.0
Cfa021245 Carpinus fangiana HOM05D006973 ORTHO05D008636 9.1e-06 54.3 51 51.0


User provided reference genes

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