Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.2e-73 278.9 142 100.0
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 6.7e-62 240.7 141 87.2
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 1.5e-61 239.6 142 87.3
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 1.8e-59 232.6 142 84.5
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.8e-59 232.6 142 85.2
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.8e-59 232.6 142 85.2
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 4.1e-59 231.5 142 84.5
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.3e-57 226.5 142 81.0
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 4.2e-56 221.5 142 77.5
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 7.2e-56 220.7 143 81.8
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 7.2e-56 220.7 136 83.1
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 7.2e-56 220.7 142 78.2
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 1.6e-55 219.5 142 81.0
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 2.1e-55 219.2 142 76.8
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 1.8e-54 216.1 142 80.3
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 3.9e-54 214.9 142 78.9
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 3.9e-54 214.9 166 69.9
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.1e-53 213.4 142 78.9
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 1.9e-53 212.6 142 78.9
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.5e-53 212.2 142 77.5
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 3.3e-53 211.8 134 79.9
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 4.3e-53 211.5 142 77.5
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 7.4e-53 210.7 144 76.4
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 7.4e-53 210.7 133 80.5
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 1.3e-52 209.9 154 72.1
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 1.3e-52 209.9 142 78.2
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 1.6e-52 209.5 137 81.0
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 6.3e-52 207.6 142 78.9
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 8.2e-52 207.2 142 76.1
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 1.4e-51 206.5 142 76.8
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 2.4e-51 205.7 147 76.2
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.1e-51 204.9 144 75.0
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 4.1e-51 204.9 144 75.0
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 4.1e-51 204.9 142 76.8
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 4.1e-51 204.9 146 77.4
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 5.3e-51 204.5 142 74.6
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 6.9e-51 204.1 142 74.6
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 9.1e-51 203.8 142 77.5
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 2.6e-50 202.2 142 76.1
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 2.6e-50 202.2 146 74.0
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 3.4e-50 201.8 143 76.2
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 3.4e-50 201.8 143 76.2
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 3.4e-50 201.8 135 78.5
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.4e-50 201.8 163 68.7
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 5.9e-50 201.1 136 77.2
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 5.9e-50 201.1 143 76.2
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 5.9e-50 201.1 142 76.8
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.3e-49 199.9 142 76.1
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 1.7e-49 199.5 114 89.5
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 2.2e-49 199.1 143 75.5
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 3.8e-49 198.4 125 81.6
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.5e-49 197.6 142 74.6
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 6.5e-49 197.6 128 80.5
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 8.5e-49 197.2 144 75.7
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 8.5e-49 197.2 142 74.6
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 8.5e-49 197.2 142 73.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 1.4e-48 196.4 142 73.9
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.9e-48 196.1 142 73.2
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 2.5e-48 195.7 142 72.5
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 3.2e-48 195.3 146 70.5
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.2e-48 195.3 142 73.9
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 4.2e-48 194.9 142 75.4
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 5.5e-48 194.5 142 74.6
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 5.5e-48 194.5 147 72.8
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 7.2e-48 194.1 142 74.6
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 9.4e-48 193.7 109 89.9
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 1.2e-47 193.4 142 73.9
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 2.1e-47 192.6 142 74.6
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.6e-47 191.4 142 70.4
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 1.4e-46 189.9 142 69.7
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.3e-46 189.1 142 72.5
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 3.0e-46 188.7 134 75.4
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 3.9e-46 188.3 142 69.7
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 3.9e-46 188.3 142 70.4
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 5.1e-46 188.0 146 69.2
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 8.8e-46 187.2 142 69.7
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 8.8e-46 187.2 141 70.9
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 2.6e-45 185.7 142 72.5
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 3.3e-45 185.3 143 69.9
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 3.3e-45 185.3 142 69.0
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 5.7e-45 184.5 142 71.1
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.3e-44 183.3 145 69.7
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.3e-44 183.3 145 69.7
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.3e-44 183.3 119 76.5
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 1.3e-44 183.3 158 65.8
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 2.2e-44 182.6 119 75.6
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 8.2e-44 180.6 120 78.3
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.4e-43 179.9 119 75.6
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.8e-43 179.5 119 74.8
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.4e-43 179.1 139 71.2
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 9.1e-43 177.2 149 66.4
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.0e-42 176.0 142 69.7
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 5.9e-42 174.5 129 69.0
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 1.3e-41 173.3 146 62.3
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 1.9e-40 169.5 133 69.9
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 1.6e-39 166.4 119 73.1
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 3.0e-38 162.2 142 63.4
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 8.2e-36 154.1 139 64.7
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.8e-35 152.9 152 60.5
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 1.6e-34 149.8 118 67.8
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 1.0e-33 147.1 118 63.6
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 1.9e-32 142.9 83 88.0
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 9.4e-32 140.6 105 74.3
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 1.6e-31 139.8 135 62.2
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.6e-31 139.8 128 59.4
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 3.6e-31 138.7 119 63.9
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 3.6e-31 138.7 119 64.7
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 3.6e-31 138.7 131 58.0
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.0e-30 137.1 85 82.4
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 1.0e-30 137.1 84 83.3
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 1.4e-30 136.7 86 80.2
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.4e-30 136.7 119 63.9
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 1.4e-30 136.7 91 76.9
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 1.4e-30 136.7 117 59.8
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 5.2e-30 134.8 119 63.0
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 5.2e-30 134.8 119 63.0
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 8.8e-30 134.0 119 62.2
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 8.8e-30 134.0 119 62.2
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 8.8e-30 134.0 119 63.9
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 1.5e-29 133.3 118 62.7
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 5.7e-29 131.3 150 54.0
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 2.2e-28 129.4 85 78.8
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 5.0e-25 118.2 73 83.6
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 7.2e-24 114.4 174 44.8
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 7.2e-24 114.4 70 81.4
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 1.6e-23 113.2 112 56.2
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 1.6e-23 113.2 89 67.4
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 3.7e-20 102.1 136 43.4
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 2.3e-14 82.8 84 57.1
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 3.0e-14 82.4 123 44.7
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 5.7e-13 78.2 63 61.9
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 2.2e-12 76.3 85 52.9
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 6.3e-12 74.7 107 45.8
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 2.8e-07 59.3 74 52.7
CBR_g10859 Chara braunii HOM05D005449 ORTHO05D006916 1.0e-06 57.4 103 34.0
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 1.4e-06 57.0 66 50.0
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 1.4e-06 57.0 66 50.0
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.4e-06 57.0 42 64.3


User provided reference genes

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