Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.2e-148 528.9 258 100.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 2.1e-138 495.7 292 86.0
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 7.7e-125 450.7 255 84.3
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.6e-122 443.0 257 83.3
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 1.3e-119 433.3 255 80.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 2.2e-119 432.6 255 78.0
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 3.7e-119 431.8 255 78.4
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.7e-119 431.8 255 78.4
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 4.9e-119 431.4 255 78.4
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.3e-119 430.6 255 78.4
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.3e-119 430.6 255 78.4
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 5.4e-118 427.9 255 77.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.3e-116 423.3 251 77.7
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 3.8e-116 421.8 255 78.0
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 9.5e-115 417.2 255 75.3
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.8e-114 415.6 255 76.5
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 4.7e-114 414.8 255 75.7
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 8.0e-114 414.1 254 75.2
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 2.2e-111 406.0 285 68.8
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 2.4e-110 402.5 255 72.9
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 6.6e-108 394.4 255 72.5
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 9.5e-107 390.6 255 72.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 1.0e-105 387.1 256 73.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.2e-104 383.6 258 69.4
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.9e-103 379.0 261 67.4
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 8.3e-103 377.5 289 64.4
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 9.2e-102 374.0 254 69.3
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.5e-101 372.1 255 67.5
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.0e-100 370.5 255 67.5
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-100 369.8 252 68.7
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.7e-100 369.8 255 67.1
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.0e-100 369.0 252 68.7
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 3.0e-100 369.0 262 69.1
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 3.9e-100 368.6 252 67.9
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 7.3e-99 364.4 255 65.9
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.4e-97 360.1 265 65.3
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 3.1e-97 359.0 255 64.7
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.5e-96 356.7 237 70.0
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 2.0e-96 356.3 255 67.1
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 4.4e-96 355.1 256 64.5
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 4.4e-96 355.1 256 61.3
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 7.5e-96 354.4 265 66.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.9e-95 351.7 261 64.8
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.0e-92 344.0 255 64.7
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 1.3e-92 343.6 259 60.6
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.6e-92 341.3 256 63.3
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 1.5e-91 340.1 233 66.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.9e-91 339.7 256 61.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.3e-91 338.6 257 62.6
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 9.5e-91 337.4 256 59.4
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.2e-90 337.0 255 63.5
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 2.1e-90 336.3 257 62.3
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.2e-90 334.7 257 61.1
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.8e-89 333.2 257 61.1
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 4.0e-89 332.0 235 66.4
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.4e-88 328.9 256 60.2
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 9.9e-88 327.4 257 59.9
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 9.9e-88 327.4 257 61.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.7e-87 326.6 210 73.8
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.7e-87 326.6 255 61.2
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 3.7e-87 325.5 259 61.8
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.1e-86 323.9 260 57.7
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 2.4e-86 322.8 193 76.7
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.2e-86 322.4 264 60.2
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 4.1e-86 322.0 259 61.0
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.1e-86 322.0 263 58.9
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 5.4e-86 321.6 234 63.7
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 7.1e-86 321.2 268 59.3
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.6e-85 320.1 259 58.7
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 2.1e-85 319.7 263 58.9
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.5e-85 318.9 258 59.7
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 4.6e-85 318.5 257 59.1
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 6.0e-85 318.2 255 57.3
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 1.3e-84 317.0 257 58.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.3e-84 317.0 258 58.5
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 1.7e-84 316.6 259 57.9
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 1.7e-84 316.6 262 58.8
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.3e-84 316.2 296 53.7
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.9e-83 313.2 259 58.3
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.5e-83 312.8 260 58.1
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 4.3e-83 312.0 258 57.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 5.6e-83 311.6 258 57.8
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.6e-82 310.1 255 56.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 6.2e-82 308.1 259 57.5
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 6.2e-82 308.1 259 57.5
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.0e-81 305.4 231 61.0
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 6.8e-81 304.7 256 58.6
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.4e-80 302.4 255 55.7
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 7.6e-80 301.2 256 58.2
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.7e-79 300.1 256 58.6
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 4.2e-78 295.4 260 53.8
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 5.6e-75 285.0 235 56.2
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 5.6e-75 285.0 272 55.9
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 3.4e-64 249.2 268 45.9
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 2.9e-63 246.1 269 48.3
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 9.6e-59 231.1 172 61.6
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 4.3e-43 179.1 140 62.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 3.1e-41 172.9 131 59.5
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 2.6e-40 169.9 281 38.1
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.3e-36 156.8 90 75.6
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 8.8e-36 154.8 124 59.7
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 8.5e-31 138.3 236 35.2
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.9e-30 137.1 255 36.5
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 6.1e-29 132.1 116 55.2
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.0e-28 131.3 98 60.2
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 3.9e-28 129.4 86 67.4
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-27 127.9 86 66.3
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.8e-25 120.6 86 62.8
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.5e-22 110.9 138 39.9
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 5.3e-17 92.4 70 60.0
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 4.2e-14 82.8 101 46.5
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 7.2e-14 82.0 64 59.4
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-12 77.8 53 62.3
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 9.1e-09 65.1 329 23.7
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 5.9e-08 62.4 38 81.6
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 7.7e-08 62.0 118 29.7
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-07 61.2 38 78.9
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.7e-07 60.8 185 29.7
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 6.5e-07 58.9 125 25.6


User provided reference genes

Program Settings