Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 3.3e-40 167.9 84 100.0
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 2.0e-29 132.1 81 81.5
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 8.3e-28 126.7 80 76.2
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 7.0e-27 123.6 80 73.8
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 9.2e-27 123.2 111 62.2
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 2.0e-26 122.1 80 73.8
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 2.3e-25 118.6 79 69.6
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 3.0e-25 118.2 82 68.3
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 8.6e-25 116.7 77 74.0
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 8.6e-25 116.7 78 70.5
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 1.1e-24 116.3 79 68.4
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.5e-24 115.9 80 68.8
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 4.3e-24 114.4 78 73.1
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 4.3e-24 114.4 78 73.1
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 4.3e-24 114.4 78 73.1
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 7.3e-24 113.6 78 67.9
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 1.6e-23 112.5 80 66.2
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 2.8e-23 111.7 79 67.1
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 3.6e-23 111.3 80 67.5
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 4.7e-23 110.9 80 66.2
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 4.7e-23 110.9 78 69.2
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 4.7e-23 110.9 74 71.6
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 4.7e-23 110.9 76 75.0
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 6.2e-23 110.5 79 65.8
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 8.1e-23 110.2 75 69.3
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.4e-22 109.4 79 68.4
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.8e-22 109.0 70 75.7
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.8e-22 109.0 82 58.5
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 2.3e-22 108.6 83 63.9
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 4.0e-22 107.8 78 66.7
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 5.2e-22 107.5 77 64.9
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 6.8e-22 107.1 75 68.0
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 6.8e-22 107.1 79 67.1
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 8.9e-22 106.7 77 64.9
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 1.2e-21 106.3 73 65.8
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 1.2e-21 106.3 78 64.1
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.2e-21 106.3 77 66.2
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.2e-21 106.3 75 66.7
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.5e-21 105.9 80 62.5
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 2.0e-21 105.5 81 61.7
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.0e-21 105.5 75 66.7
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 3.4e-21 104.8 82 64.6
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 3.4e-21 104.8 79 65.8
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 5.8e-21 104.0 74 66.2
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 7.5e-21 103.6 78 62.8
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 7.5e-21 103.6 70 71.4
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.3e-20 102.8 71 66.2
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.3e-20 102.8 78 65.4
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 1.7e-20 102.4 79 60.8
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 1.7e-20 102.4 79 60.8
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 1.7e-20 102.4 73 68.5
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 2.2e-20 102.1 82 61.0
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 2.9e-20 101.7 78 60.3
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 2.9e-20 101.7 78 61.5
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 3.7e-20 101.3 69 68.1
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 4.9e-20 100.9 79 58.2
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 6.4e-20 100.5 78 60.3
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 6.4e-20 100.5 79 59.5
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 6.4e-20 100.5 69 68.1
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 8.3e-20 100.1 83 62.7
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.4e-19 99.4 78 60.3
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 1.4e-19 99.4 68 69.1
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 2.4e-19 98.6 67 74.6
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 2.4e-19 98.6 78 59.0
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 4.1e-19 97.8 78 57.7
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 4.1e-19 97.8 79 58.2
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 5.4e-19 97.4 80 62.5
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 5.4e-19 97.4 77 59.7
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 5.4e-19 97.4 79 57.0
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 5.4e-19 97.4 79 57.0
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 7.8e-18 93.6 71 60.6
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 1.7e-17 92.4 68 63.2
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 1.7e-17 92.4 68 63.2
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 2.3e-17 92.0 79 53.2
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.3e-17 92.0 69 60.9
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.0e-17 91.7 61 72.1
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 3.0e-17 91.7 77 55.8
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 3.0e-17 91.7 64 62.5
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 1.5e-16 89.4 63 69.8
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.5e-16 89.4 70 55.7
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 3.3e-16 88.2 54 79.6
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 4.3e-16 87.8 79 59.5
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 4.3e-16 87.8 61 67.2
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 7.3e-16 87.0 61 65.6
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.6e-15 85.9 74 59.5
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 3.1e-14 81.6 65 56.9
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 3.1e-14 81.6 65 56.9
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 3.1e-14 81.6 62 61.3
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 6.8e-14 80.5 53 69.8
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 1.5e-13 79.3 64 62.5
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 4.4e-13 77.8 54 72.2
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 7.6e-13 77.0 64 59.4
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.7e-12 75.9 50 70.0
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.7e-12 75.9 64 56.2
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.1e-11 73.2 48 70.8
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 3.2e-11 71.6 70 55.7
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 6.0e-10 67.4 57 56.1
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 6.0e-10 67.4 51 58.8
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 7.8e-10 67.0 47 59.6
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 3.1e-06 55.1 53 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 6.9e-06 53.9 45 51.1


User provided reference genes

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