Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G095900 Carya illinoinensis HOM05D002930 ORTHO05D003283 2.6e-169 598.6 297 100.0
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 2.8e-126 455.7 296 78.7
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 1.8e-125 453.0 296 77.7
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 2.0e-124 449.5 296 77.7
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 2.6e-108 396.0 296 69.3
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 5.4e-106 388.3 296 65.5
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 7.1e-106 387.9 296 63.5
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 9.2e-106 387.5 296 65.2
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 2.1e-105 386.3 296 66.6
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 6.0e-105 384.8 296 66.6
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 1.2e-102 377.1 296 65.2
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 2.1e-102 376.3 296 63.9
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.8e-102 375.9 296 64.2
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 2.4e-101 372.9 296 63.9
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 4.0e-101 372.1 296 64.9
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 4.0e-101 372.1 296 63.9
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.4e-100 369.0 296 63.2
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.8e-100 368.2 296 63.2
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 7.6e-100 367.9 296 63.9
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 9.9e-100 367.5 296 63.9
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 1.3e-99 367.1 297 65.0
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 1.7e-99 366.7 296 63.5
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 2.9e-99 365.9 295 63.1
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.9e-99 365.2 296 62.8
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 8.4e-99 364.4 281 64.1
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.7e-97 359.4 297 63.0
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 2.3e-96 356.3 297 60.9
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 3.0e-96 355.9 297 62.6
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 3.0e-96 355.9 290 62.4
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 3.9e-96 355.5 296 60.8
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 1.9e-95 353.2 297 62.0
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 9.6e-95 350.9 297 61.6
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 1.4e-93 347.1 220 75.9
Psat6g169880 Pisum sativum HOM05D002930 ORTHO05D003283 2.4e-93 346.3 296 59.8
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 2.4e-93 346.3 297 61.6
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 3.4e-92 342.4 296 59.5
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 1.7e-91 340.1 296 60.5
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 8.4e-91 337.8 296 59.5
Rhsim01G0277700 Rhododendron simsii HOM05D002930 ORTHO05D003283 2.4e-90 336.3 296 60.1
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.6e-89 333.6 296 57.4
Actinidia21090 Actinidia chinensis HOM05D002930 ORTHO05D003283 2.1e-89 333.2 296 58.8
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 3.5e-89 332.4 296 58.8
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 1.3e-86 323.9 296 55.4
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 2.1e-86 323.2 296 57.8
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 3.7e-86 322.4 284 58.1
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 2.4e-85 319.7 296 56.8
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 9.0e-85 317.8 296 55.4
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 9.0e-85 317.8 296 55.1
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 1.5e-84 317.0 295 56.9
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 2.0e-84 316.6 296 55.1
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 2.0e-84 316.6 296 55.4
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 2.0e-84 316.6 296 54.4
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 1.3e-83 313.9 297 56.6
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 2.9e-83 312.8 296 54.7
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 1.4e-82 310.5 296 54.4
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 5.5e-82 308.5 296 54.4
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 1.6e-81 307.0 296 54.1
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 3.5e-81 305.8 297 54.2
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 7.9e-81 304.7 296 52.4
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 3.0e-80 302.8 296 53.4
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 3.9e-80 302.4 296 53.0
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 3.9e-80 302.4 296 53.0
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 1.5e-79 300.4 296 53.0
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 1.5e-79 300.4 296 53.0
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 5.6e-79 298.5 294 52.7
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 1.6e-78 297.0 296 54.4
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 2.1e-78 296.6 296 52.4
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 6.2e-78 295.0 297 54.2
Gohir.D13G110101 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-77 293.9 296 54.4
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 3.1e-77 292.7 296 52.0
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 4.0e-77 292.4 296 52.4
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 6.9e-77 291.6 296 51.0
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 2.0e-76 290.0 296 51.4
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 2.0e-76 290.0 296 52.7
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.6e-76 289.7 296 53.0
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 5.8e-76 288.5 296 52.4
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.0e-75 287.7 291 53.3
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 4.9e-75 285.4 296 52.4
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.1e-74 284.3 296 51.0
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 2.5e-74 283.1 296 49.0
MBI19_g21638_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 1.2e-73 280.8 360 46.4
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 2.1e-73 280.0 296 49.7
HPP92_027329 Vanilla planifolia HOM05D002930 ORTHO05D003283 3.5e-73 279.3 296 50.7
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 6.0e-73 278.5 218 60.6
HPP92_017200 Vanilla planifolia HOM05D002930 ORTHO05D003283 2.3e-72 276.6 296 50.3
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 5.1e-72 275.4 296 50.7
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 5.1e-72 275.4 296 51.0
Aqoxy211s001 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 8.7e-72 274.6 220 60.0
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 1.5e-71 273.9 296 51.0
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.9e-71 273.5 279 52.7
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 1.9e-71 273.5 220 60.0
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 5.7e-71 271.9 282 51.1
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 2.2e-70 270.0 296 48.3
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 6.3e-70 268.5 297 48.5
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 8.2e-70 268.1 296 50.0
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 8.2e-70 268.1 295 47.8
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 2.0e-68 263.5 296 47.0
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 1.7e-67 260.4 216 59.3
Gohir.D05G174300 Gossypium hirsutum HOM05D002930 ORTHO05D003283 6.5e-67 258.5 167 70.1
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 8.5e-67 258.1 316 47.8
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.4e-66 257.3 218 60.1
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.1e-65 253.4 296 48.6
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 3.6e-65 252.7 304 47.0
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 1.0e-64 251.1 296 45.9
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 1.5e-63 247.3 297 47.1
Gorai.012G158000 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.7e-63 245.4 159 71.7
DCAR_012455 Daucus carota HOM05D002930 ORTHO05D003283 4.8e-62 242.3 279 50.5
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 2.6e-60 236.5 290 44.8
Lalb_Chr04g0260851 Lupinus albus HOM05D002930 ORTHO05D003283 5.9e-60 235.3 206 54.9
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.3e-59 234.2 296 45.6
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 1.7e-59 233.8 278 47.1
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 9.1e-53 211.5 206 52.4
Gorai.009G179600 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.2e-52 211.1 143 69.2
Ah.04g159840 Amaranthus hybridus HOM05D002930 ORTHO05D003283 1.1e-50 204.5 230 48.3
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 6.1e-49 198.7 295 39.7
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 3.9e-48 196.1 114 78.1
CDE08G1131 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 8.8e-48 194.9 167 59.3
Gohir.A08G185020 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.5e-47 194.1 115 76.5
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 4.4e-47 192.6 161 58.4
Gohir.D02G096000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.8e-46 189.9 115 75.7
Gorai.005G109700 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.8e-46 189.9 115 74.8
Gohir.D10G213350 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.7e-46 189.5 115 74.8
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 1.4e-45 187.6 161 55.3
Gorai.008G067700 Gossypium raimondii HOM05D002930 ORTHO05D003283 7.0e-45 185.3 127 70.1
Gohir.A08G185060 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.9e-44 182.2 182 54.9
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.0e-43 181.4 186 54.8
Gohir.D01G034401 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.2e-42 176.0 112 72.3
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 2.1e-41 173.7 186 53.8
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 9.7e-39 164.9 115 64.3
SHI15440 Sapria himalayana HOM05D002930 ORTHO05D003283 3.1e-37 159.8 113 67.3
Gohir.D04G169700 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.0e-35 154.8 97 69.1
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 1.1e-34 151.4 294 34.4
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 2.3e-32 143.7 296 34.8
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 4.4e-31 139.4 289 31.8
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 2.2e-30 137.1 297 31.0
CSS0000102 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D033878 6.3e-30 135.6 247 36.4
Hund05358 Selenicereus undatus HOM05D002930 ORTHO05D003283 2.3e-27 127.1 167 44.3
Gohir.D07G104000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.6e-27 125.2 77 72.7
Gohir.A07G059600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-26 123.2 77 71.4
Gohir.D07G116100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-26 123.2 77 71.4
Gohir.D10G155925 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.3e-26 123.2 77 71.4
Gorai.013G151200 Gossypium raimondii HOM05D002930 ORTHO05D003283 3.3e-26 123.2 77 71.4
Gohir.D04G075400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.2e-26 122.9 77 71.4
Gohir.D01G193850 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-26 122.5 80 68.8
Gorai.001G179200 Gossypium raimondii HOM05D002930 ORTHO05D003283 7.2e-26 122.1 77 70.1
QL03p004191 Quercus lobata HOM05D002930 ORTHO05D003283 9.5e-26 121.7 123 55.3
Gohir.D11G258550 Gossypium hirsutum HOM05D002930 ORTHO05D003283 8.0e-25 118.6 77 67.5
Gorai.007G276800 Gossypium raimondii HOM05D002930 ORTHO05D003283 8.0e-25 118.6 77 67.5
Gohir.D11G053151 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.8e-24 117.5 74 70.3
Gohir.D02G064100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 4.0e-24 116.3 74 68.9
QL03p004772 Quercus lobata HOM05D002930 ORTHO05D003283 2.0e-23 114.0 100 59.0
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 2.6e-23 113.6 297 29.0
PGSC0003DMG400003808 Solanum tuberosum HOM05D002930 ORTHO05D003283 5.7e-23 112.5 106 54.7
Gohir.D06G133100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.8e-23 111.7 76 67.1
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 4.9e-22 109.4 300 27.3
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 2.0e-20 104.0 289 27.7
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 4.3e-18 96.3 66 62.1
Gorai.004G134200 Gossypium raimondii HOM05D002930 ORTHO05D003283 4.0e-16 89.7 126 44.4
Gohir.D12G152250 Gossypium hirsutum HOM05D002930 ORTHO05D003283 3.4e-15 86.7 125 44.0
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 3.2e-13 80.1 128 42.2
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 8.6e-11 72.0 89 40.4
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 4.3e-10 69.7 163 27.6
CBR_g45308 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-09 67.0 296 27.0
VMungo0540G1535 Vigna mungo HOM05D002930 ORTHO05D003283 8.3e-06 55.5 141 29.1


User provided reference genes

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