Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 8.8e-93 343.6 171 100.0
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.4e-58 229.9 165 70.3
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 5.4e-58 228.0 166 69.3
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 3.0e-56 222.2 166 66.3
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 6.6e-56 221.1 173 64.7
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 1.9e-55 219.5 163 66.9
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.9e-55 219.5 165 66.1
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 7.3e-55 217.6 165 64.8
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 1.2e-54 216.9 164 66.5
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.1e-54 216.1 165 66.1
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.7e-54 214.9 165 64.8
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 6.2e-54 214.5 168 66.7
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-53 213.4 166 63.3
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 2.0e-52 209.5 170 65.9
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 2.0e-52 209.5 165 67.3
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.6e-49 199.9 170 64.7
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.7e-49 199.1 171 60.2
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 2.7e-49 199.1 168 62.5
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.3e-48 196.8 162 61.1
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 1.7e-48 196.4 169 63.9
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 3.9e-48 195.3 149 65.8
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 8.6e-48 194.1 166 59.6
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 8.6e-48 194.1 157 61.1
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 7.3e-47 191.0 166 59.0
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.2e-46 190.3 171 62.0
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 4.7e-46 188.3 144 68.8
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 6.2e-46 188.0 171 60.8
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 8.1e-46 187.6 164 59.8
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.1e-45 187.2 167 59.3
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.4e-45 186.8 171 60.2
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.4e-45 186.8 173 62.4
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.4e-45 186.0 162 63.0
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 5.2e-45 184.9 153 62.1
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.5e-44 183.3 165 57.0
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 4.4e-44 181.8 150 60.0
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 5.8e-44 181.4 164 57.3
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 5.8e-44 181.4 130 67.7
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 7.6e-44 181.0 169 60.4
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 9.9e-44 180.6 161 59.6
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 2.9e-43 179.1 164 57.9
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 3.8e-43 178.7 167 55.7
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 4.9e-43 178.3 164 57.3
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 4.9e-43 178.3 163 55.2
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 6.4e-43 177.9 103 77.7
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 1.1e-42 177.2 143 60.1
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.1e-42 177.2 169 59.8
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.4e-42 176.8 161 55.9
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.9e-42 176.4 103 74.8
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.9e-42 176.4 169 60.4
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 2.4e-42 176.0 144 59.0
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 4.2e-42 175.3 162 55.6
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 5.4e-42 174.9 115 75.7
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 5.4e-42 174.9 115 75.7
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 5.4e-42 174.9 131 64.9
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 7.1e-42 174.5 167 53.9
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 9.3e-42 174.1 115 73.0
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 1.2e-41 173.7 161 56.5
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.2e-41 173.7 173 56.6
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.6e-41 173.3 165 55.8
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.7e-41 172.6 185 55.7
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.0e-40 170.6 164 55.5
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.7e-40 169.9 145 60.7
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 5.1e-40 168.3 164 53.0
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 6.6e-40 167.9 106 68.9
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.1e-39 167.2 163 53.4
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.5e-39 166.8 164 53.7
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 2.5e-39 166.0 148 57.4
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 2.8e-38 162.5 164 51.8
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 2.8e-38 162.5 164 51.8
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 2.8e-38 162.5 164 51.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.6e-38 162.2 156 55.8
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 4.8e-38 161.8 156 55.1
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 6.2e-38 161.4 164 50.6
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 6.2e-38 161.4 155 53.5
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 6.2e-38 161.4 164 50.6
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 8.1e-38 161.0 155 53.5
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.1e-37 160.6 175 49.1
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.4e-37 159.5 175 52.6
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 5.3e-37 158.3 164 51.2
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 4.4e-36 155.2 157 54.1
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 7.6e-36 154.5 195 46.7
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 2.2e-35 152.9 95 69.5
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.9e-35 151.8 94 74.5
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 7.1e-34 147.9 89 77.5
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 1.6e-33 146.7 180 47.8
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 3.0e-32 142.5 103 65.0
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 6.6e-32 141.4 102 65.7
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.9e-31 139.8 157 51.0
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 7.3e-31 137.9 99 62.6
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 2.8e-30 136.0 136 50.0
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 3.6e-30 135.6 117 53.0
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 6.2e-30 134.8 146 51.4
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.8e-29 133.3 148 54.1
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.4e-29 132.9 138 52.2
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 3.1e-29 132.5 94 68.1
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 4.0e-29 132.1 94 60.6
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 1.5e-28 130.2 101 55.4
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 4.2e-26 122.1 100 69.0
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 3.3e-23 112.5 166 42.2
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.3e-21 105.1 69 69.6
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 2.0e-20 103.2 86 55.8
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 4.9e-19 98.6 169 41.4
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 7.1e-18 94.7 93 53.8
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 3.5e-17 92.4 69 60.9
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 6.7e-16 88.2 97 52.6
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.7e-15 85.1 53 73.6
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.7e-09 66.2 93 50.5


User provided reference genes

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