Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 9.1e-80 300.4 182 100.0
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 4.3e-61 238.4 183 71.6
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.4e-51 206.8 183 61.7
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 2.3e-51 206.1 182 64.3
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 5.2e-51 204.9 181 65.2
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 2.2e-49 199.5 125 82.4
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.4e-48 196.8 183 62.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.4e-48 196.1 184 62.0
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 2.4e-48 196.1 183 61.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.6e-47 193.4 183 60.1
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 2.7e-47 192.6 188 64.9
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 7.8e-47 191.0 183 59.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.7e-46 189.9 184 60.9
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.3e-46 189.5 183 61.2
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 2.3e-46 189.5 183 58.5
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 6.6e-46 188.0 183 57.4
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.1e-45 187.2 183 62.8
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.5e-45 186.8 183 59.6
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 7.3e-45 184.5 183 62.3
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.2e-44 183.7 186 61.3
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 2.8e-44 182.6 186 59.1
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 6.2e-44 181.4 183 60.7
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 8.1e-44 181.0 184 58.2
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.1e-43 180.6 186 60.8
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 1.4e-43 180.3 183 61.7
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.0e-43 178.7 183 56.3
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.2e-42 177.2 183 61.7
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.5e-42 176.8 183 62.8
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.5e-42 176.8 185 61.6
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.5e-42 176.8 182 57.7
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 2.0e-42 176.4 186 55.9
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 2.0e-42 176.4 183 61.7
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.4e-42 175.3 183 54.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 7.5e-42 174.5 182 56.6
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 7.5e-42 174.5 193 61.7
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.3e-41 173.7 179 60.9
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 2.2e-41 172.9 186 56.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.2e-41 172.9 183 63.4
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 4.9e-41 171.8 180 57.8
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 6.4e-41 171.4 183 59.6
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 8.3e-41 171.0 120 76.7
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.4e-40 170.2 186 57.0
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.2e-39 167.2 194 55.7
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.6e-39 166.8 180 59.4
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 2.1e-39 166.4 180 60.6
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 2.7e-39 166.0 183 53.0
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 3.5e-39 165.6 180 58.9
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 4.6e-39 165.2 183 52.5
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 5.1e-38 161.8 193 52.3
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 2.5e-37 159.5 183 53.6
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.8e-36 156.0 185 58.4
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.1e-36 154.5 123 66.7
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.1e-35 154.1 126 65.9
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.3e-35 152.9 198 53.5
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 4.0e-35 152.1 185 54.1
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 2.0e-34 149.8 109 72.5
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 9.9e-34 147.5 122 66.4
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 1.3e-33 147.1 130 62.3
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 3.2e-32 142.5 183 53.0
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 4.1e-32 142.1 184 57.1
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 2.3e-30 136.3 193 48.2
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 6.6e-30 134.8 126 61.9
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 1.9e-29 133.3 185 53.0
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.5e-29 132.9 119 58.8
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 5.6e-29 131.7 192 46.9
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 7.3e-29 131.3 185 51.4
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.2e-28 130.6 193 50.8
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.7e-28 128.6 121 57.9
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 6.2e-28 128.3 119 57.1
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.1e-27 127.5 120 60.8
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.1e-27 127.5 119 57.1
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 1.8e-27 126.7 119 56.3
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 2.4e-27 126.3 119 57.1
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.4e-27 126.3 119 57.1
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 3.1e-27 125.9 119 57.1
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 3.1e-27 125.9 119 57.1
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 3.1e-27 125.9 119 57.1
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 3.1e-27 125.9 122 55.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 5.2e-27 125.2 120 56.7
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 5.2e-27 125.2 120 57.5
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 8.9e-27 124.4 120 56.7
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 8.9e-27 124.4 193 46.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 1.5e-26 123.6 182 49.5
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.4e-26 122.5 191 50.8
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 5.8e-26 121.7 191 51.3
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 8.4e-25 117.9 120 53.3
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 1.1e-24 117.5 137 52.6
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.4e-24 117.1 141 52.5
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 1.2e-23 114.0 125 55.2
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 5.1e-22 108.6 196 41.8
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 5.1e-22 108.6 126 50.0
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 5.6e-21 105.1 183 45.4
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 5.6e-21 105.1 192 41.1
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.4e-19 100.5 124 50.8
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.4e-19 100.5 193 45.6
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 9.0e-19 97.8 194 40.2
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 4.2e-16 89.0 185 37.3
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 1.2e-15 87.4 74 68.9
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 3.5e-15 85.9 189 36.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 1.5e-13 80.5 182 36.3
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.9e-13 80.1 73 53.4
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.3e-13 79.3 124 45.2
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 8.1e-12 74.7 134 38.8
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 6.9e-11 71.6 182 34.1
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 6.4e-09 65.1 87 46.0
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 6.4e-09 65.1 129 38.0
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 7.1e-08 61.6 182 35.2
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 7.9e-07 58.2 178 30.9


User provided reference genes

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