Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 4.4e-164 581.3 299 100.0
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 3.6e-134 481.9 299 83.3
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.7e-121 439.1 298 74.2
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 8.7e-120 434.1 297 75.4
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.9e-119 433.0 300 72.3
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 4.0e-117 425.2 298 71.8
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 9.0e-117 424.1 306 71.6
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.2e-116 423.7 306 73.9
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.0e-116 422.9 298 71.1
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 1.3e-115 420.2 301 71.1
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 1.6e-113 413.3 285 73.0
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 3.5e-113 412.1 300 67.3
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 4.6e-113 411.8 293 71.0
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 6.0e-113 411.4 301 70.8
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.0e-112 410.6 298 69.8
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 3.0e-112 409.1 299 67.9
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 6.7e-112 407.9 314 66.9
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.1e-111 407.1 274 71.9
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 1.9e-111 406.4 298 70.5
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 7.4e-111 404.4 284 70.4
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 9.6e-111 404.1 294 69.4
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-110 403.7 294 69.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 1.6e-110 403.3 293 71.7
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 3.7e-110 402.1 295 71.9
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 4.8e-110 401.7 301 65.8
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 6.2e-110 401.4 294 69.4
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.8e-109 399.8 302 69.5
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 3.1e-109 399.1 304 68.8
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 5.3e-109 398.3 302 69.2
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.3e-109 398.3 297 66.7
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 5.3e-109 398.3 297 67.7
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 6.9e-109 397.9 298 69.1
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 6.9e-109 397.9 295 68.8
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 1.5e-108 396.7 294 68.0
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.5e-108 396.7 300 67.7
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 5.8e-108 394.8 294 68.4
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 7.6e-108 394.4 296 68.6
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 9.9e-108 394.0 303 69.0
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.7e-107 393.3 312 69.9
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 2.2e-107 392.9 309 66.7
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 2.2e-107 392.9 299 68.9
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 2.2e-107 392.9 296 69.3
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 3.8e-107 392.1 310 67.1
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 8.4e-107 391.0 299 65.9
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 3.2e-106 389.0 282 67.4
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.2e-106 388.7 296 67.2
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 7.1e-106 387.9 310 68.1
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 7.1e-106 387.9 304 65.8
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 2.1e-105 386.3 271 74.9
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 2.1e-105 386.3 349 60.2
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 7.9e-105 384.4 296 67.6
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 7.9e-105 384.4 298 64.1
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 3.9e-104 382.1 303 66.0
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 5.1e-104 381.7 304 67.4
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 1.1e-103 380.6 294 65.0
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 4.3e-103 378.6 280 67.1
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 5.6e-103 378.3 318 62.9
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 5.6e-103 378.3 296 67.2
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 7.4e-103 377.9 296 66.6
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 9.6e-103 377.5 277 66.8
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.1e-102 376.3 294 64.6
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.1e-102 376.3 296 66.9
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 1.1e-101 374.0 297 64.6
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.0e-101 372.1 318 61.6
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 4.0e-101 372.1 313 67.4
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.5e-100 370.2 299 62.9
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 3.4e-100 369.0 285 67.7
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 5.8e-100 368.2 288 66.0
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 1.3e-99 367.1 305 65.2
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.9e-99 365.9 279 65.9
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 4.9e-99 365.2 301 64.8
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 2.5e-98 362.8 332 59.9
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 2.5e-98 362.8 293 63.5
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 3.2e-98 362.5 307 61.2
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 4.2e-98 362.1 294 62.2
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.7e-97 359.4 297 61.6
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.5e-97 359.0 297 62.0
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.8e-96 356.7 326 58.3
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 2.5e-95 352.8 294 62.6
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 7.4e-95 351.3 290 64.8
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 2.8e-94 349.4 300 60.3
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 3.7e-94 349.0 300 64.0
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.8e-93 346.7 307 62.2
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 3.1e-93 345.9 288 62.5
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 4.2e-90 335.5 234 70.1
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.0e-88 330.9 306 61.8
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 2.3e-88 329.7 296 60.5
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 2.5e-87 326.2 296 59.1
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 4.3e-87 325.5 282 59.9
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 7.4e-87 324.7 296 59.8
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 3.7e-86 322.4 292 58.9
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 2.9e-83 312.8 298 56.0
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 2.9e-83 312.8 299 58.9
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.2e-81 307.4 245 69.4
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 2.6e-76 289.7 283 53.7
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 2.9e-75 286.2 285 53.3
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 1.4e-74 283.9 194 71.6
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.0e-72 277.7 226 61.9
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 3.1e-69 266.2 211 62.6
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.7e-65 253.1 176 70.5
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 1.2e-63 247.7 191 65.4
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 3.1e-61 239.6 160 78.8
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 1.2e-60 237.7 186 66.1
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.5e-58 230.7 167 69.5
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 5.5e-58 228.8 300 46.0
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.8e-56 221.9 210 56.2
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 5.7e-55 218.8 298 45.0
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 9.8e-55 218.0 141 72.3
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.6e-52 210.7 124 83.1
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 3.5e-52 209.5 177 63.3
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.0e-48 198.0 158 63.3
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 6.8e-48 195.3 220 50.9
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 3.4e-47 193.0 288 39.6
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 7.8e-44 181.8 285 38.2
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 7.8e-44 181.8 195 50.3
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 8.6e-43 178.3 143 64.3
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 5.2e-40 169.1 298 35.6
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.1e-37 161.4 144 68.8
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.6e-36 156.0 104 76.0
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 2.5e-34 150.2 104 71.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.3e-34 149.8 134 61.2
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 2.9e-30 136.7 89 71.9
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.2e-25 121.3 90 70.0
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 8.1e-25 118.6 120 54.2
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 9.9e-23 111.7 275 32.7
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.2e-22 110.5 104 59.6
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 4.6e-20 102.8 110 52.7
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 6.0e-20 102.4 77 64.9
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.9e-18 97.4 112 55.4
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 1.8e-16 90.9 233 30.0
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 2.9e-14 83.6 101 49.5
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 2.5e-10 70.5 85 50.6
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 1.4e-08 64.7 177 28.8
Actinidia12444 Actinidia chinensis HOM05D005786 ORTHO05D006946 8.4e-06 55.5 36 69.4


User provided reference genes

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