Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 9.4e-229 796.6 423 100.0
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.3e-166 590.1 407 80.1
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 3.9e-158 562.0 406 76.6
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.1e-156 556.2 540 62.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.2e-146 523.9 404 70.8
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.2e-146 523.9 410 73.4
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.7e-145 520.0 411 72.5
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.7e-145 520.0 408 68.1
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.9e-145 518.5 422 68.5
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 8.4e-145 517.7 409 68.0
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 4.2e-144 515.4 410 68.0
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.6e-143 513.5 410 71.5
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 4.6e-143 511.9 418 67.9
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 1.8e-142 510.0 405 72.1
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 6.7e-142 508.1 402 71.1
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 5.7e-141 505.0 404 69.3
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 6.3e-140 501.5 408 66.4
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 8.2e-140 501.1 414 67.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 8.2e-140 501.1 413 67.1
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.5e-138 496.9 408 68.1
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 3.4e-138 495.7 421 67.5
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.9e-137 492.7 407 68.3
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.9e-136 490.0 408 68.1
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.9e-136 490.0 408 68.4
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.5e-136 489.6 425 64.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 3.2e-136 489.2 410 67.8
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.2e-136 489.2 425 64.9
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 4.2e-136 488.8 407 65.6
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 7.2e-136 488.0 405 69.4
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 9.4e-136 487.6 411 68.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 9.4e-136 487.6 405 68.1
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.2e-135 487.3 407 66.3
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 6.1e-135 485.0 407 67.1
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 6.1e-135 485.0 413 65.4
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.9e-135 484.6 425 64.5
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-133 480.7 425 64.2
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-133 480.7 425 64.2
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.1e-133 480.7 411 63.5
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 3.3e-133 479.2 412 66.3
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.7e-132 476.9 405 64.9
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 1.7e-132 476.9 406 65.5
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.8e-132 476.1 406 68.7
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 6.3e-132 474.9 358 71.8
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.4e-131 473.8 405 64.4
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 1.4e-131 473.8 423 62.2
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 3.1e-131 472.6 406 66.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 6.9e-131 471.5 430 63.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.5e-130 470.3 411 63.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 4.5e-130 468.8 426 63.4
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.9e-130 468.4 428 62.4
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.0e-129 467.6 415 63.6
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.0e-129 467.6 411 63.7
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 6.5e-129 464.9 411 64.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 6.5e-129 464.9 413 63.4
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.9e-128 463.4 411 65.2
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.5e-128 463.0 426 62.2
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 3.2e-128 462.6 432 61.1
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 4.2e-128 462.2 404 66.1
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.1e-125 454.1 431 60.8
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 2.0e-125 453.4 406 64.8
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.6e-125 453.0 440 61.4
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.7e-124 450.3 435 59.8
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.7e-124 450.3 409 65.5
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 2.8e-124 449.5 410 64.4
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 4.8e-124 448.7 409 60.9
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 4.8e-124 448.7 429 59.4
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 8.2e-124 448.0 430 59.1
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.4e-123 447.2 413 61.7
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.4e-123 446.4 406 63.5
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 3.1e-123 446.0 340 70.9
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 5.3e-123 445.3 434 62.0
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.5e-122 443.7 355 69.6
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 4.5e-122 442.2 437 59.3
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.5e-122 442.2 426 60.1
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 5.9e-122 441.8 412 62.9
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 1.0e-121 441.0 426 60.1
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-121 441.0 426 60.1
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.0e-121 441.0 416 61.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.7e-121 440.3 407 63.6
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.9e-121 439.5 407 64.4
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 8.5e-121 438.0 431 59.6
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.1e-120 437.6 438 58.0
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.2e-120 436.0 414 61.1
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.4e-120 434.5 402 61.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 9.4e-120 434.5 414 60.4
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.8e-118 430.3 336 69.3
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 3.3e-117 426.0 407 59.5
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 5.7e-117 425.2 347 67.4
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.7e-116 423.7 404 59.2
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.4e-115 420.6 438 57.5
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.8e-115 420.2 410 60.0
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 5.0e-113 412.1 428 55.6
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.9e-112 410.2 428 55.4
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.0e-110 402.9 436 55.7
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.3e-108 397.5 429 55.2
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.6e-103 379.4 378 56.3
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 4.7e-103 379.0 406 57.1
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 3.4e-101 372.9 323 65.3
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 2.9e-97 359.8 327 61.5
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 6.6e-97 358.6 354 57.1
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.3e-92 344.4 337 55.2
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 8.3e-92 341.7 313 60.4
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.1e-91 341.3 269 67.7
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.0e-81 308.1 319 61.4
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.6e-79 299.7 402 46.0
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.4e-77 292.7 268 58.6
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 7.3e-72 275.4 402 42.5
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 4.4e-69 266.2 333 48.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.2e-66 258.1 309 52.1
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 5.1e-65 252.7 213 63.4
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.9e-56 224.2 376 38.3
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.2e-55 221.5 261 56.3
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 1.4e-46 191.4 201 55.7
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.9e-43 181.0 129 72.1
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.2e-35 153.3 88 80.7
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.6e-23 114.8 353 28.0
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 8.2e-23 112.5 488 24.8
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 5.3e-22 109.8 141 51.8
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.2e-21 108.6 82 68.3
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 3.4e-13 80.5 173 35.8
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 2.7e-10 70.9 321 23.4
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 3.0e-09 67.4 66 54.5
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 1.5e-08 65.1 163 33.1
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-08 65.1 46 69.6
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 2.0e-08 64.7 122 40.2
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 4.4e-08 63.5 85 41.2


User provided reference genes

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