Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2546.5 1285 100.0
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2362.8 1287 92.2
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2314.3 1286 89.7
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2306.2 1285 89.2
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2304.2 1285 89.1
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2302.3 1285 89.0
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2295.4 1287 88.7
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2292.3 1301 87.9
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2291.2 1287 89.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2289.6 1287 89.5
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2288.1 1287 89.0
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2286.5 1287 88.6
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2284.2 1286 89.0
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2281.1 1287 87.8
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2279.6 1290 88.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2276.5 1287 88.6
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2271.9 1300 87.8
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2271.5 1285 88.3
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2267.7 1286 87.5
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2265.3 1292 87.9
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2259.2 1286 87.6
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2253.8 1287 87.6
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2245.3 1288 87.6
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2244.5 1287 87.1
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2240.3 1286 86.2
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2236.5 1288 87.3
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2229.5 1288 87.1
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2226.4 1303 86.1
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2222.2 1303 85.9
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2220.3 1288 86.5
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2219.1 1294 86.9
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2218.7 1294 86.3
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2217.6 1325 85.1
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2215.7 1295 85.2
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2209.5 1292 86.3
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2207.9 1288 86.1
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2204.5 1307 86.5
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2201.4 1288 84.9
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2195.6 1284 85.0
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2189.1 1286 85.5
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2187.9 1288 84.6
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2187.1 1284 85.0
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2185.6 1284 84.4
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2185.6 1284 84.5
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2183.7 1288 83.9
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2181.0 1284 84.3
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2181.0 1285 84.4
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2177.9 1288 83.9
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2177.5 1288 84.2
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2176.7 1300 83.9
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2175.2 1286 84.4
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2172.9 1293 83.6
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2169.0 1287 84.1
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2167.5 1289 85.2
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2163.3 1293 85.1
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2161.3 1288 83.4
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2158.6 1296 83.1
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2158.6 1311 83.8
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2158.6 1288 83.3
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2157.1 1287 83.8
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2152.1 1288 83.7
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2148.6 1287 83.5
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2145.5 1285 82.3
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2141.3 1288 83.2
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2140.2 1287 83.1
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2119.4 1297 81.9
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2115.5 1287 81.8
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2113.2 1294 82.1
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2087.8 1297 80.9
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2055.0 1415 75.2
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2025.8 1215 82.6
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2013.8 1548 69.7
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1980.7 1174 83.6
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1979.9 1221 80.2
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1965.3 1286 78.1
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1937.2 1291 74.9
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1895.2 1288 73.1
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1806.6 1315 72.0
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1687.9 961 88.6
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1677.9 955 88.2
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1661.7 941 87.4
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1634.0 1069 78.9
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1583.2 907 85.7
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1572.8 937 82.6
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1556.6 914 84.5
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1546.6 1208 65.7
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1538.5 1290 60.4
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1535.0 1293 59.6
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1534.2 1328 58.4
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1530.8 911 82.9
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1528.1 909 82.6
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1497.6 1175 66.0
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1476.5 1289 57.9
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1474.5 846 86.4
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1459.9 911 79.5
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1389.4 954 74.0
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1345.5 1307 52.9
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1300.8 916 69.7
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1152.9 688 85.2
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 4.0e-262 909.1 803 60.5
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 1.4e-254 884.0 826 57.7
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 3.0e-246 856.3 476 90.1
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 2.3e-217 760.4 499 77.8
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 6.2e-215 752.3 451 84.9
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 3.5e-202 709.9 552 67.8
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 8.7e-185 652.1 348 95.7
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 3.1e-182 643.7 348 94.3
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 7.6e-181 639.0 420 75.0
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 5.7e-176 622.9 348 91.7
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 4.8e-175 619.8 353 90.4
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 3.0e-169 600.5 348 88.2
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 8.7e-169 599.0 348 89.1
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 1.4e-163 581.6 348 86.8
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 2.8e-159 567.4 449 64.1
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 2.5e-155 554.3 335 80.9
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 3.3e-152 543.9 385 70.6
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 4.5e-149 533.5 637 44.0
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 8.5e-148 529.3 422 70.6
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 1.5e-144 518.5 302 83.8
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 1.8e-142 511.5 275 94.5
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 1.7e-132 478.4 254 95.3
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.7e-125 454.5 301 72.4
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 4.3e-123 447.2 410 60.2
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 1.8e-121 441.8 275 85.5
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 8.3e-119 433.0 243 88.1
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 3.4e-112 411.0 348 64.7
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.8e-106 391.3 260 79.2
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 4.0e-105 387.5 266 80.1
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 2.7e-85 321.6 264 61.7
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.8e-76 292.4 166 83.7
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 2.1e-74 285.4 154 94.8
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 8.7e-68 263.5 465 32.7
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 2.5e-62 245.4 134 90.3
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 4.8e-58 231.1 130 90.0
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 4.8e-58 231.1 426 37.8
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 1.5e-56 226.1 132 84.1
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 2.9e-55 221.9 142 72.5
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 2.3e-52 212.2 119 83.2
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 3.7e-50 204.9 127 78.0
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 3.7e-42 178.3 98 84.7
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.4e-41 175.6 98 83.7
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 3.5e-40 171.8 127 66.9
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 3.5e-40 171.8 164 55.5
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 1.0e-39 170.2 123 72.4
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.2e-36 157.9 113 68.1
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.0e-35 156.0 128 67.2
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 1.3e-34 153.3 123 66.7
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 8.0e-29 134.0 95 62.1
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.7e-26 125.2 85 65.9
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.1e-25 123.6 75 81.3
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.1e-25 123.6 75 80.0
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.0e-23 117.1 73 75.3
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 5.0e-23 114.8 73 75.3
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 5.0e-23 114.8 130 52.3
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 1.6e-16 93.2 99 55.6
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.5e-14 86.7 54 77.8
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 7.2e-14 84.3 77 58.4
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 4.1e-09 68.6 142 35.2
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 6.6e-07 61.2 34 82.4


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