Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 4.7e-155 551.2 291 100.0
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 3.1e-122 442.2 310 76.8
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.4e-113 412.1 293 80.2
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 3.9e-109 398.7 294 74.1
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 7.4e-108 394.4 418 56.5
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.3e-107 393.7 289 72.7
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.8e-106 389.8 295 71.5
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.1e-106 389.0 293 72.7
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 2.6e-105 386.0 293 70.3
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 2.6e-105 386.0 318 68.9
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 2.6e-105 386.0 299 70.6
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 5.9e-105 384.8 297 73.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 8.5e-104 380.9 299 70.6
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 2.5e-103 379.4 291 69.8
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 3.2e-103 379.0 296 70.3
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.2e-103 378.6 297 69.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.7e-102 375.9 300 68.7
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 2.7e-102 375.9 300 68.7
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 4.7e-102 375.2 298 69.8
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 4.7e-102 375.2 292 70.2
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 6.1e-102 374.8 285 70.2
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 6.1e-102 374.8 292 69.2
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 7.9e-102 374.4 295 70.5
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.4e-101 373.6 292 69.5
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.8e-101 373.2 295 70.5
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.8e-101 373.2 295 70.2
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 3.9e-101 372.1 286 72.4
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.6e-100 369.4 290 69.7
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 2.6e-100 369.4 291 70.4
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.6e-100 369.4 291 68.7
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 5.7e-100 368.2 301 66.8
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 7.4e-100 367.9 291 69.8
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.7e-99 366.7 293 68.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.7e-99 366.7 301 66.8
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 2.2e-99 366.3 296 68.6
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 3.7e-99 365.5 294 69.4
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.3e-99 364.8 291 68.0
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 8.2e-99 364.4 295 69.5
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.4e-98 363.6 376 57.2
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 4.1e-98 362.1 295 69.5
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 4.1e-98 362.1 291 68.4
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 5.3e-98 361.7 294 69.4
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 1.2e-97 360.5 292 67.5
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 8.5e-96 354.4 292 66.4
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-95 354.0 294 65.6
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 1.1e-95 354.0 301 68.1
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.9e-95 353.2 329 61.7
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 3.2e-95 352.4 292 68.8
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.6e-94 349.0 204 85.8
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 3.6e-94 349.0 201 86.1
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.3e-93 346.3 291 66.3
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.1e-92 344.0 289 67.1
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 1.5e-92 343.6 288 65.3
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 7.4e-92 341.3 292 65.4
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.3e-91 340.5 299 65.2
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 2.8e-91 339.3 292 65.8
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 2.8e-91 339.3 289 67.1
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.1e-90 337.4 297 64.3
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.1e-90 337.4 297 64.6
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.6e-89 333.6 293 66.6
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 7.7e-89 331.3 292 63.7
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.7e-88 330.1 288 63.9
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 1.7e-88 330.1 291 64.9
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 1.7e-88 330.1 359 56.0
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 2.2e-88 329.7 287 61.7
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 1.9e-87 326.6 291 62.2
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.9e-87 326.6 288 61.8
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 4.2e-87 325.5 305 58.4
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 5.5e-87 325.1 289 61.6
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 5.2e-85 318.5 299 62.9
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.2e-84 317.4 304 61.5
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 7.5e-84 314.7 296 61.1
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.3e-83 313.9 207 76.3
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.2e-83 313.2 215 73.5
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 1.8e-82 310.1 291 61.9
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 9.1e-82 307.8 316 56.3
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 1.2e-81 307.4 303 59.1
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.6e-81 307.0 294 60.2
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 2.0e-81 306.6 290 60.3
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 3.5e-81 305.8 298 59.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 4.5e-81 305.4 292 59.9
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 8.5e-80 301.2 331 54.4
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 2.5e-79 299.7 198 75.8
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 2.1e-78 296.6 295 59.3
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.7e-78 296.2 199 75.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 6.8e-77 291.6 288 58.0
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 9.8e-76 287.7 211 66.8
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.7e-75 287.0 309 54.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 1.4e-74 283.9 195 72.3
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 3.1e-74 282.7 292 55.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 9.1e-74 281.2 324 53.1
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 1.2e-73 280.8 234 63.2
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 4.7e-70 268.9 249 61.8
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.7e-67 260.4 154 83.8
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 8.3e-67 258.1 252 59.1
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 5.0e-64 248.8 231 58.9
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 3.6e-62 242.7 331 48.3
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 2.0e-60 236.9 161 77.0
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.7e-59 232.6 233 57.9
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.1e-55 221.1 131 84.0
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.6e-54 217.2 133 84.2
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.4e-52 209.5 214 58.4
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 8.6e-48 194.9 240 48.3
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 6.2e-46 188.7 110 84.5
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 6.2e-46 188.7 211 53.1
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 6.8e-45 185.3 411 35.8
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.6e-38 162.9 186 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 4.3e-31 139.4 133 57.1
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.4e-29 134.4 231 40.7
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.0e-29 132.9 96 71.9
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.1e-26 124.8 80 73.8
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 5.1e-24 115.9 75 77.3
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.2e-20 104.8 295 33.6
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.0e-13 79.7 61 68.9
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 6.9e-13 79.0 255 29.8
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.6e-12 75.5 84 47.6
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 2.9e-11 73.6 70 54.3
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 8.7e-08 62.0 38 73.7
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 3.3e-07 60.1 59 57.6
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 3.3e-07 60.1 37 70.3
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.3e-06 58.2 37 70.3


User provided reference genes

Program Settings