Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 7.2e-116 420.6 216 100.0
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.5e-30 136.0 200 53.5
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 1.7e-24 117.1 146 61.0
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 2.1e-22 110.2 201 41.3
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 1.0e-21 107.8 200 39.5
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.9e-20 103.6 191 42.9
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.6e-20 102.1 196 42.9
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 4.8e-19 99.0 219 38.8
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 6.2e-19 98.6 194 42.3
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.1e-18 97.8 212 41.5
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.4e-18 97.4 202 40.6
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 2.4e-18 96.7 201 39.8
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 4.0e-18 95.9 202 37.6
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.0e-17 93.6 199 38.2
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 2.0e-17 93.6 216 39.8
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 2.0e-17 93.6 200 38.0
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 2.6e-17 93.2 194 40.7
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 4.5e-17 92.4 202 37.6
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.3e-16 90.9 203 37.9
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.1e-15 87.8 215 37.7
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.4e-15 87.4 228 33.3
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 1.9e-15 87.0 206 35.9
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.5e-15 86.7 222 36.0
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 7.1e-15 85.1 200 39.5
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 7.1e-15 85.1 200 39.0
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 7.1e-15 85.1 200 39.0
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 7.1e-15 85.1 197 35.5
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.6e-14 84.0 203 36.9
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 2.7e-14 83.2 200 36.5
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.0e-13 81.3 226 32.3
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 1.3e-13 80.9 192 37.5
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 2.3e-13 80.1 198 33.8
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 2.3e-13 80.1 190 32.6
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.9e-13 79.3 202 37.1
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 5.1e-13 79.0 202 37.1
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.7e-13 78.6 216 34.7
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 6.7e-13 78.6 202 34.7
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 8.7e-13 78.2 193 35.8
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.1e-12 77.8 216 33.3
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 1.1e-12 77.8 220 33.2
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 1.1e-12 77.8 213 36.2
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 1.9e-12 77.0 186 36.6
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 2.5e-12 76.6 192 35.9
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 3.3e-12 76.3 190 34.2
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 3.3e-12 76.3 200 33.5
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.3e-12 75.9 213 35.7
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.7e-12 75.5 191 35.6
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 7.4e-12 75.1 203 36.0
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 7.4e-12 75.1 197 38.6
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 9.6e-12 74.7 202 35.6
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 1.3e-11 74.3 192 35.4
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.3e-11 74.3 216 33.8
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 1.3e-11 74.3 207 33.3
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.6e-11 73.9 133 37.6
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 1.6e-11 73.9 185 36.8
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 1.6e-11 73.9 213 34.7
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.8e-11 73.2 212 33.5
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 3.7e-11 72.8 180 36.1
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 4.8e-11 72.4 191 32.5
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 4.8e-11 72.4 193 34.7
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 6.3e-11 72.0 166 36.1
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 1.8e-10 70.5 186 33.3
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.8e-10 70.5 204 33.3
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.4e-10 70.1 196 35.2
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.1e-10 69.7 209 34.4
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.1e-10 69.7 217 34.1
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 3.1e-10 69.7 188 34.6
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 3.1e-10 69.7 191 34.6
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 4.1e-10 69.3 208 31.7
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 6.9e-10 68.6 195 36.4
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 9.0e-10 68.2 225 34.7
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 9.0e-10 68.2 188 36.2
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.2e-09 67.8 213 34.3
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 1.5e-09 67.4 190 35.3
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 2.6e-09 66.6 207 33.8
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 2.6e-09 66.6 187 32.6
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 3.4e-09 66.2 211 33.2
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 3.4e-09 66.2 198 30.8
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 3.4e-09 66.2 192 30.7
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 4.5e-09 65.9 204 29.4
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 5.9e-09 65.5 199 30.2
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 5.9e-09 65.5 231 33.3
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 5.9e-09 65.5 220 32.7
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 7.6e-09 65.1 190 34.7
Phvul.003G267350 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 7.6e-09 65.1 186 33.9
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 1.0e-08 64.7 209 35.4
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.0e-08 64.7 192 31.8
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 1.0e-08 64.7 189 33.3
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 1.3e-08 64.3 199 29.6
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 2.2e-08 63.5 186 29.0
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.2e-08 63.5 191 35.6
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 2.2e-08 63.5 192 32.8
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 2.2e-08 63.5 191 33.0
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.9e-08 63.2 224 32.6
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.9e-08 63.2 189 30.7
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 2.9e-08 63.2 190 32.1
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 3.8e-08 62.8 221 33.0
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 5.0e-08 62.4 199 30.7
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 5.0e-08 62.4 195 35.4
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 5.0e-08 62.4 218 28.4
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 6.5e-08 62.0 227 33.0
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 6.5e-08 62.0 197 30.5
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 6.5e-08 62.0 205 29.8
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 1.1e-07 61.2 189 31.2
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 1.9e-07 60.5 211 30.8
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.9e-07 60.5 193 29.0
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 3.2e-07 59.7 196 29.1
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 3.2e-07 59.7 191 32.5
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.2e-07 59.7 195 34.9
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 3.2e-07 59.7 187 31.0
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 3.2e-07 59.7 189 31.2
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 4.2e-07 59.3 191 33.5
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 5.5e-07 58.9 215 31.2
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 5.5e-07 58.9 224 31.7
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 5.5e-07 58.9 209 28.7
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 5.5e-07 58.9 208 34.1
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 7.2e-07 58.5 137 32.8
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 7.2e-07 58.5 141 39.7
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 9.3e-07 58.2 172 31.4
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 9.3e-07 58.2 199 30.7
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 1.6e-06 57.4 188 27.1
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 1.6e-06 57.4 187 28.9
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 2.1e-06 57.0 195 31.8
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 2.1e-06 57.0 201 28.9
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 2.7e-06 56.6 172 30.8
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 3.6e-06 56.2 180 25.0
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 4.6e-06 55.8 190 28.4
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 6.1e-06 55.5 216 28.7
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 7.9e-06 55.1 178 29.2
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 7.9e-06 55.1 141 29.1


User provided reference genes

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