Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G062800 Carya illinoinensis HOM05D007821 ORTHO05D009897 1.3e-75 286.2 135 100.0
QL06p051907 Quercus lobata HOM05D007821 ORTHO05D009897 8.0e-57 223.8 135 82.2
Cfa007023 Carpinus fangiana HOM05D007821 ORTHO05D009897 8.9e-56 220.3 131 80.2
Dinv40139 Davidia involucrata HOM05D007821 ORTHO05D009897 3.5e-52 208.4 136 73.5
Manes.02G109600 Manihot esculenta HOM05D007821 ORTHO05D009897 1.2e-49 199.9 135 73.3
Prupe.7G174100 Prunus persica HOM05D007821 ORTHO05D009897 2.8e-49 198.7 138 71.0
Thecc.01G012400 Theobroma cacao HOM05D007821 ORTHO05D009897 6.2e-49 197.6 136 71.3
Potri.005G108633 Populus trichocarpa HOM05D007821 ORTHO05D009897 3.1e-48 195.3 128 71.9
Gohir.D11G179200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 2.0e-47 192.6 135 67.4
Gorai.007G191100 Gossypium raimondii HOM05D007821 ORTHO05D009897 2.0e-47 192.6 135 67.4
Sabra05G0089000 Salix brachista HOM05D006929 ORTHO05D008646 2.6e-47 192.2 128 71.1
COL.COLO4_22487 Corchorus olitorius HOM05D007821 ORTHO05D009897 3.4e-47 191.8 129 69.0
Duzib147G1309 Durio zibethinus HOM05D007821 ORTHO05D009897 9.8e-47 190.3 135 67.4
Ciclev10026734m.g Citrus clementina HOM05D007821 ORTHO05D009897 1.7e-46 189.5 134 68.7
Gohir.A11G172200 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.1e-45 186.8 135 65.2
RcHm_v2.0_Chr2g0098471 Rosa chinensis HOM05D007821 ORTHO05D009897 2.4e-45 185.7 139 68.3
FvH4_1g11180 Fragaria vesca HOM05D007821 ORTHO05D009897 4.1e-45 184.9 139 68.3
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 4.1e-45 184.9 139 68.3
FAN28G2391 Fragaria x ananassa HOM05D007821 ORTHO05D009897 4.1e-45 184.9 139 68.3
Hma1.2p1_0315F.1_g122510 Hydrangea macrophylla HOM05D007821 ORTHO05D009897 7.1e-45 184.1 137 67.9
TAR376G1238 Trochodendron aralioides HOM05D007821 ORTHO05D009897 6.0e-44 181.0 135 65.9
FAN23G1973 Fragaria x ananassa HOM05D007821 ORTHO05D009897 5.1e-43 177.9 139 66.9
Nn5g30827 Nelumbo nucifera HOM05D007821 ORTHO05D009897 5.1e-43 177.9 128 65.6
Lj4g0018241 Lotus japonicus HOM05D007821 ORTHO05D009897 1.9e-42 176.0 136 63.2
TWI73G0676 Tripterygium wilfordii HOM05D007821 ORTHO05D009897 4.3e-42 174.9 138 66.7
Gohir.D10G089100 Gossypium hirsutum HOM05D007821 ORTHO05D009897 5.6e-42 174.5 128 64.8
Gorai.011G098000 Gossypium raimondii HOM05D007821 ORTHO05D009897 5.6e-42 174.5 128 64.8
Gohir.A10G099000 Gossypium hirsutum HOM05D007821 ORTHO05D009897 1.2e-41 173.3 128 64.8
Aqoxy6G02053 Aquilegia oxysepala HOM05D007821 ORTHO05D009897 1.6e-41 172.9 131 62.6
Phvul.003G266700 Phaseolus vulgaris HOM05D007821 ORTHO05D009897 8.1e-41 170.6 135 62.2
MD15G1238300 Malus domestica HOM05D007821 ORTHO05D009897 2.3e-40 169.1 138 62.3
DCAR_011577 Daucus carota HOM05D007821 ORTHO05D009897 3.1e-40 168.7 126 61.9
VMungo0251G0901 Vigna mungo HOM05D007821 ORTHO05D009897 4.0e-40 168.3 134 59.0
Oeu039727.1 Olea europaea HOM05D007821 ORTHO05D009897 5.2e-40 167.9 137 58.4
Actinidia35672 Actinidia chinensis HOM05D007821 ORTHO05D009897 6.8e-40 167.5 139 61.9
MD02G1124300 Malus domestica HOM05D007821 ORTHO05D009897 6.8e-40 167.5 138 61.6
Psat4g102440 Pisum sativum HOM05D007821 ORTHO05D009897 8.9e-40 167.2 134 61.2
CsaV3_6G047470 Cucumis sativus L. HOM05D007821 ORTHO05D009897 2.0e-39 166.0 135 61.5
MELO3C033032.2 Cucumis melo HOM05D007821 ORTHO05D009897 9.9e-39 163.7 135 60.0
Oeu012560.1 Olea europaea HOM05D007821 ORTHO05D009897 3.8e-38 161.8 132 58.3
Glyma.02G044900 Glycine max HOM05D007821 ORTHO05D009897 4.9e-38 161.4 131 58.8
Medtr8g075000 Medicago truncatula HOM05D007821 ORTHO05D009897 8.4e-38 160.6 146 56.8
Medtr8g075080 Medicago truncatula HOM05D007821 ORTHO05D009897 8.4e-38 160.6 146 56.8
PSO675G1463 Papaver somniferum HOM05D007821 ORTHO05D009897 8.4e-38 160.6 139 56.8
Glyma.16G122400 Glycine max HOM05D007821 ORTHO05D009897 1.4e-37 159.8 131 58.0
arahy.Tifrunner.gnm1.ann1.B80PS6 Arachis hypogaea HOM05D007821 ORTHO05D009897 4.1e-37 158.3 109 65.1
Cc07_g11250 Coffea canephora HOM05D007821 ORTHO05D009897 2.7e-36 155.6 138 58.0
arahy.Tifrunner.gnm1.ann1.F8FFU1 Arachis hypogaea HOM05D007821 ORTHO05D009897 1.3e-35 153.3 136 56.6
Peaxi162Scf00328g00213 Petunia axillaris HOM05D007821 ORTHO05D009897 3.9e-35 151.8 133 57.9
PGR119G1098 Punica granatum HOM05D007821 ORTHO05D009897 6.6e-35 151.0 133 56.4
TPR.G19477 Trifolium pratense HOM05D006929 ORTHO05D008646 1.1e-34 150.2 174 47.7
PSO541G0785 Papaver somniferum HOM05D007821 ORTHO05D009897 3.3e-34 148.7 138 55.1
Nitab4.5_0006899g0050 Nicotiana tabacum HOM05D007821 ORTHO05D009897 5.6e-34 147.9 133 57.1
Nitab4.5_0016722g0010 Nicotiana tabacum HOM05D007821 ORTHO05D009897 4.0e-32 141.7 133 56.4
GSVIVG01006893001 Vitis vinifera HOM05D007821 ORTHO05D009897 4.0e-32 141.7 113 61.9
CANSAT01G0454 Cannabis sativa HOM05D007821 ORTHO05D009897 2.6e-31 139.0 147 55.8
Sed0025726 Sechium edule HOM05D007821 ORTHO05D009897 2.6e-31 139.0 124 59.7
Sopen02g028230 Solanum pennellii HOM05D007821 ORTHO05D009897 3.4e-31 138.7 110 60.9
Solyc02g083440.3 Solanum lycopersicum HOM05D007821 ORTHO05D009897 1.3e-30 136.7 110 60.9
PGSC0003DMG400003657 Solanum tuberosum HOM05D007821 ORTHO05D009897 1.3e-30 136.7 110 60.9
Atru.chr3.889 Acer truncatum HOM05D007821 ORTHO05D009897 6.4e-30 134.4 125 54.4
Atru.chr3.899 Acer truncatum HOM05D007821 ORTHO05D009897 6.4e-30 134.4 125 54.4
CAN.G890.37 Capsicum annuum HOM05D007821 ORTHO05D009897 3.2e-29 132.1 120 56.7
EL10Ac6g13327 Beta vulgaris HOM05D007821 ORTHO05D009897 2.7e-28 129.0 115 54.8
Lalb_Chr09g0334261 Lupinus albus HOM05D007821 ORTHO05D009897 3.6e-25 118.6 78 66.7
FAN26G1107 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.4e-24 115.9 104 60.6
Eucgr.I02312 Eucalyptus grandis HOM05D007821 ORTHO05D009897 5.3e-24 114.8 138 47.8
AUR62026417 Chenopodium quinoa HOM05D007821 ORTHO05D009897 1.2e-23 113.6 96 56.2
AUR62026232 Chenopodium quinoa HOM05D007821 ORTHO05D009897 2.6e-23 112.5 113 50.4
Aa31sc1371G20 Aethionema arabicum HOM05D007821 ORTHO05D009897 6.0e-20 101.3 99 50.5
AL5G31800 Arabidopsis lyrata HOM05D007821 ORTHO05D009897 4.0e-16 88.6 96 47.9
HanXRQChr15g0484781 Helianthus annuus HOM05D007821 ORTHO05D009897 4.0e-16 88.6 144 38.2
Sp5g10860 Schrenkiella parvula HOM05D007821 ORTHO05D009897 6.9e-16 87.8 96 46.9
Carub.0005s1774 Capsella rubella HOM05D007821 ORTHO05D009897 1.5e-15 86.7 97 47.4
A01p23500 Brassica napus HOM05D007821 ORTHO05D009897 9.9e-15 84.0 97 45.4
BraA01t02257Z Brassica rapa HOM05D007821 ORTHO05D009897 9.9e-15 84.0 97 45.4
A09p44430 Brassica napus HOM05D007821 ORTHO05D009897 1.3e-14 83.6 100 44.0
BraA09t39902Z Brassica rapa HOM05D007821 ORTHO05D009897 1.3e-14 83.6 100 44.0
BolC8t50278H Brassica oleracea HOM05D007821 ORTHO05D009897 2.2e-14 82.8 100 43.0
C01p29170 Brassica napus HOM05D007821 ORTHO05D009897 3.8e-14 82.0 102 45.1
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 8.4e-14 80.9 97 48.5
BolC1t02847H Brassica oleracea HOM05D007821 ORTHO05D009897 1.1e-13 80.5 102 45.1
C08p26640 Brassica napus HOM05D007821 ORTHO05D009897 1.4e-13 80.1 100 42.0
ECA246G2630 Erigeron canadensis HOM05D007821 ORTHO05D009897 3.2e-13 79.0 117 44.4
C07p46290 Brassica napus HOM05D007821 ORTHO05D009897 1.5e-10 70.1 97 41.2
ClCG01G020560 Citrullus lanatus HOM05D007821 ORTHO05D009897 4.3e-10 68.6 54 64.8
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 4.3e-10 68.6 93 41.9
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 7.4e-10 67.8 88 42.0
Rhsim08G0030600 Rhododendron simsii HOM05D007821 ORTHO05D009897 1.3e-09 67.0 66 51.5
Pp3c20_7460 Physcomitrium patens HOM05D001188 ORTHO05D001032 1.1e-08 63.9 97 39.2
Pp3c20_7510 Physcomitrium patens HOM05D001188 ORTHO05D001032 1.1e-08 63.9 97 39.2
Ah.03g137620 Amaranthus hybridus HOM05D001188 ORTHO05D001032 2.4e-08 62.8 116 32.8
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 2.4e-08 62.8 112 39.3
GSVIVG01008289001 Vitis vinifera HOM05D001188 ORTHO05D001032 9.0e-08 60.8 89 39.3
HanXRQChr09g0252661 Helianthus annuus HOM05D001188 ORTHO05D001032 1.2e-07 60.5 128 32.0
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 1.5e-07 60.1 99 36.4
Dinv34823 Davidia involucrata HOM05D001188 ORTHO05D001032 4.5e-07 58.5 82 40.2
AUR62002861 Chenopodium quinoa HOM05D001188 ORTHO05D001032 7.6e-07 57.8 95 36.8
Hund20797 Selenicereus undatus HOM05D001188 ORTHO05D001032 1.0e-06 57.4 95 33.7
Lsat_1_v5_gn_8_40640 Lactuca sativa HOM05D001188 ORTHO05D001032 1.3e-06 57.0 99 33.3
CiPaw.04G042000 Carya illinoinensis HOM05D001188 ORTHO05D001032 2.2e-06 56.2 138 31.9
MBI16_g35167_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D001032 2.9e-06 55.8 85 40.0
Peaxi162Scf00382g00824 Petunia axillaris HOM05D001188 ORTHO05D001032 2.9e-06 55.8 86 40.7
Rhsim10G0067000 Rhododendron simsii HOM05D001188 ORTHO05D001032 2.9e-06 55.8 81 35.8
TAR374G1010 Trochodendron aralioides HOM05D001188 ORTHO05D001032 2.9e-06 55.8 137 30.7
CARHR076560 Cardamine hirsuta HOM05D001188 ORTHO05D001032 3.8e-06 55.5 105 35.2
MBI10_g16030_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D001032 6.5e-06 54.7 83 36.1
SMO197G0029 Selaginella moellendorffii HOM05D001188 ORTHO05D001032 6.5e-06 54.7 89 37.1


User provided reference genes

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