Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G054500 Carya illinoinensis HOM05D005163 ORTHO05D006462 0.0e+00 1109.7 542 100.0
Cfa006924 Carpinus fangiana HOM05D005163 ORTHO05D006462 1.1e-285 986.1 539 88.9
QL06p034609 Quercus lobata HOM05D005163 ORTHO05D006462 1.4e-277 959.1 539 85.9
Manes.02G100000 Manihot esculenta HOM05D005163 ORTHO05D006462 1.9e-274 948.7 540 84.1
GSVIVG01018847001 Vitis vinifera HOM05D005163 ORTHO05D006462 4.2e-274 947.6 540 85.4
Haze_03825 Corylus avellana HOM05D005163 ORTHO05D006462 6.1e-273 943.7 518 87.5
arahy.Tifrunner.gnm1.ann1.U51VHD Arachis hypogaea HOM05D005163 ORTHO05D006462 5.2e-272 940.6 539 83.1
arahy.Tifrunner.gnm1.ann1.U2HICA Arachis hypogaea HOM05D005163 ORTHO05D006462 6.8e-272 940.3 539 82.9
Gohir.A12G062100 Gossypium hirsutum HOM05D005163 ORTHO05D006462 5.7e-271 937.2 540 83.9
Thecc.01G025400 Theobroma cacao HOM05D005163 ORTHO05D006462 5.7e-271 937.2 540 83.1
RcHm_v2.0_Chr2g0100261 Rosa chinensis HOM05D005163 ORTHO05D006462 1.7e-270 935.6 539 82.9
Gorai.008G065200 Gossypium raimondii HOM05D005163 ORTHO05D006462 8.3e-270 933.3 540 83.5
Cc07_g10240 Coffea canephora HOM05D005163 ORTHO05D006462 3.1e-269 931.4 540 83.0
MD02G1137100 Malus domestica HOM05D005163 ORTHO05D006462 4.1e-269 931.0 539 82.6
Ciclev10025040m.g Citrus clementina HOM05D005163 ORTHO05D006462 7.0e-269 930.2 540 83.5
TPR.G2381 Trifolium pratense HOM05D005163 ORTHO05D006462 2.7e-268 928.3 539 82.4
FvH4_1g12400 Fragaria vesca HOM05D005163 ORTHO05D006462 3.5e-268 927.9 539 82.6
Sed0007947 Sechium edule HOM05D005163 ORTHO05D006462 7.7e-268 926.8 540 82.6
Hma1.2p1_0913F.1_g236050 Hydrangea macrophylla HOM05D005163 ORTHO05D006462 2.2e-267 925.2 540 83.1
MELO3C007876.2 Cucumis melo HOM05D005163 ORTHO05D006462 3.8e-267 924.5 540 83.0
Ca_24882_v3 Cicer arietinum L. HOM05D005163 ORTHO05D006462 5.0e-267 924.1 539 82.0
Glyma.01G170600 Glycine max HOM05D005163 ORTHO05D006462 5.0e-267 924.1 539 82.2
CsaV3_6G046790 Cucumis sativus L. HOM05D005163 ORTHO05D006462 1.9e-266 922.2 540 82.2
Atru.chr3.745 Acer truncatum HOM05D005163 ORTHO05D006462 2.5e-266 921.8 540 82.8
ClCG01G020030 Citrullus lanatus HOM05D005163 ORTHO05D006462 2.5e-266 921.8 544 82.4
TAR376G0780 Trochodendron aralioides HOM05D005163 ORTHO05D006462 2.5e-266 921.8 540 82.0
TWI73G0422 Tripterygium wilfordii HOM05D005163 ORTHO05D006462 3.2e-266 921.4 540 82.4
Potri.005G118300 Populus trichocarpa HOM05D005163 ORTHO05D006462 4.2e-266 921.0 542 82.7
PGR102G2820 Punica granatum HOM05D005163 ORTHO05D006462 7.2e-266 920.2 543 81.0
Lj2g0010053 Lotus japonicus HOM05D005163 ORTHO05D006462 9.4e-266 919.8 539 81.4
HanXRQChr14g0441521 Helianthus annuus HOM05D005163 ORTHO05D006462 1.2e-265 919.5 540 81.3
Lj4C212G4 Lonicera japonica HOM05D005163 ORTHO05D006462 2.7e-265 918.3 539 82.9
Potri.007G017600 Populus trichocarpa HOM05D005163 ORTHO05D006462 6.1e-265 917.1 541 82.1
MD15G1250800 Malus domestica HOM05D005163 ORTHO05D006462 1.0e-264 916.4 539 81.8
Medtr5g021150 Medicago truncatula HOM05D005163 ORTHO05D006462 1.8e-264 915.6 540 81.5
Psat2g156920 Pisum sativum HOM05D005163 ORTHO05D006462 2.3e-264 915.2 539 81.4
VMungo1215G3295 Vigna mungo HOM05D005163 ORTHO05D006462 5.2e-264 914.1 539 81.6
Nitab4.5_0000723g0040 Nicotiana tabacum HOM05D005163 ORTHO05D006462 6.8e-264 913.7 540 81.7
Lalb_Chr05g0212611 Lupinus albus HOM05D005163 ORTHO05D006462 8.8e-264 913.3 539 81.1
Sabra07G0015000 Salix brachista HOM05D005163 ORTHO05D006462 8.8e-264 913.3 540 81.7
Lsat_1_v5_gn_2_78240 Lactuca sativa HOM05D005163 ORTHO05D006462 1.5e-263 912.5 540 80.4
Peaxi162Scf00084g01221 Petunia axillaris HOM05D005163 ORTHO05D006462 5.7e-263 910.6 540 81.7
Sed0022975 Sechium edule HOM05D005163 ORTHO05D006462 5.7e-263 910.6 540 80.9
Phvul.002G166800 Phaseolus vulgaris HOM05D005163 ORTHO05D006462 7.5e-263 910.2 539 80.7
MSTRG.23270 Avicennia marina HOM05D005163 ORTHO05D006462 2.8e-262 908.3 540 80.6
Glyma.11G072700 Glycine max HOM05D005163 ORTHO05D006462 2.8e-262 908.3 539 80.9
ECA238G0541 Erigeron canadensis HOM05D005163 ORTHO05D006462 8.3e-262 906.7 540 80.2
Nitab4.5_0007070g0020 Nicotiana tabacum HOM05D005163 ORTHO05D006462 1.1e-261 906.4 540 81.1
HanXRQChr07g0191281 Helianthus annuus HOM05D005163 ORTHO05D006462 4.1e-261 904.4 542 80.4
Ah.02g124830 Amaranthus hybridus HOM05D005163 ORTHO05D006462 3.5e-260 901.4 541 80.4
Eucgr.J02388 Eucalyptus grandis HOM05D005163 ORTHO05D006462 4.5e-260 901.0 540 79.3
Migut.H02494 Erythranthe guttata HOM05D005163 ORTHO05D006462 1.3e-259 899.4 540 79.4
Lalb_Chr16g0377681 Lupinus albus HOM05D005163 ORTHO05D006462 1.3e-259 899.4 539 80.5
Rhsim08G0123900 Rhododendron simsii HOM05D005163 ORTHO05D006462 2.5e-258 895.2 565 78.1
SalBow8G4654 Salvia bowleyana HOM05D005163 ORTHO05D006462 2.5e-258 895.2 540 79.3
Hund16465 Selenicereus undatus HOM05D005163 ORTHO05D006462 3.3e-258 894.8 547 79.5
Sc03g0003300 Simmondsia chinensis HOM05D005163 ORTHO05D006462 1.2e-257 892.9 541 80.0
Aqoxy5G01510 Aquilegia oxysepala HOM05D005163 ORTHO05D006462 2.8e-257 891.7 540 79.3
CAN.G358.18 Capsicum annuum HOM05D005163 ORTHO05D006462 3.6e-257 891.3 540 79.8
Sopen02g029360 Solanum pennellii HOM05D005163 ORTHO05D006462 4.7e-257 891.0 540 80.4
Solyc02g084690.3 Solanum lycopersicum HOM05D005163 ORTHO05D006462 1.4e-256 889.4 540 80.2
PGSC0003DMG400003539 Solanum tuberosum HOM05D005163 ORTHO05D006462 1.4e-256 889.4 540 80.2
Oeu024029.1 Olea europaea HOM05D005163 ORTHO05D006462 5.7e-255 884.0 541 79.1
Prupe.7G163500 Prunus persica HOM05D005163 ORTHO05D006462 4.9e-254 880.9 539 80.3
Aa31LG4G19160 Aethionema arabicum HOM05D005163 ORTHO05D006462 1.1e-253 879.8 540 78.3
CANSAT01G3091 Cannabis sativa HOM05D005163 ORTHO05D006462 1.8e-253 879.0 539 78.8
Gohir.A11G178900 Gossypium hirsutum HOM05D005163 ORTHO05D006462 3.2e-253 878.2 540 78.0
Gorai.007G198300 Gossypium raimondii HOM05D005163 ORTHO05D006462 4.1e-253 877.9 540 77.8
CARHR160630 Cardamine hirsuta HOM05D005163 ORTHO05D006462 1.2e-252 876.3 540 78.0
Thhalv10010167m.g Eutrema salsugineum HOM05D005163 ORTHO05D006462 1.2e-252 876.3 540 78.1
THA.LOC104826639 Tarenaya hassleriana HOM05D005163 ORTHO05D006462 2.0e-252 875.5 540 78.5
PSO541G1023 Papaver somniferum HOM05D005163 ORTHO05D006462 2.7e-252 875.2 541 78.0
FAN28G1722 Fragaria x ananassa HOM05D005163 ORTHO05D006462 4.6e-252 874.4 539 79.0
Actinidia19230 Actinidia chinensis HOM05D005163 ORTHO05D006462 6.6e-251 870.5 540 78.5
Sp5g11160 Schrenkiella parvula HOM05D005163 ORTHO05D006462 3.3e-250 868.2 541 77.3
Carub.0005s1745 Capsella rubella HOM05D005163 ORTHO05D006462 4.7e-249 864.4 540 77.2
SGA_v2.0_scaffold280G46851 Striga asiatica HOM05D005163 ORTHO05D006462 1.8e-248 862.4 559 75.7
C07p46120 Brassica napus HOM05D005163 ORTHO05D006462 2.6e-247 858.6 540 75.9
BolC7t45128H Brassica oleracea HOM05D005163 ORTHO05D006462 2.6e-247 858.6 540 75.9
PSO675G4614 Papaver somniferum HOM05D005163 ORTHO05D006462 4.4e-247 857.8 541 76.7
AL5G31470 Arabidopsis lyrata HOM05D005163 ORTHO05D006462 1.3e-246 856.3 542 77.1
AT3G51050 Arabidopsis thaliana HOM05D005163 ORTHO05D006462 1.4e-245 852.8 542 76.8
AUR62007635 Chenopodium quinoa HOM05D005163 ORTHO05D006462 2.4e-245 852.0 567 74.3
A03p48100 Brassica napus HOM05D005163 ORTHO05D006462 7.0e-245 850.5 540 75.6
ATR0661G156 Amborella trichopoda HOM05D005163 ORTHO05D006462 9.2e-245 850.1 540 76.1
Oeu005146.2 Olea europaea HOM05D005163 ORTHO05D006462 2.7e-244 848.6 594 71.5
Actinidia26108 Actinidia chinensis HOM05D005163 ORTHO05D006462 1.0e-243 846.7 540 77.4
HPP92_021000 Vanilla planifolia HOM05D005163 ORTHO05D006462 1.0e-243 846.7 540 76.9
Duzib147G0248 Durio zibethinus HOM05D005163 ORTHO05D006462 3.9e-243 844.7 540 77.2
Nn5g29168 Nelumbo nucifera HOM05D005163 ORTHO05D006462 4.7e-241 837.8 540 75.9
EL10As8g23870 Beta vulgaris HOM05D005163 ORTHO05D006462 6.2e-241 837.4 541 76.3
FAN23G1678 Fragaria x ananassa HOM05D005163 ORTHO05D006462 6.8e-240 833.9 527 76.9
FAN19G3097 Fragaria x ananassa HOM05D005163 ORTHO05D006462 2.6e-239 832.0 527 76.9
AUR62004121 Chenopodium quinoa HOM05D005163 ORTHO05D006462 7.5e-239 830.5 589 71.8
CSS0019296 Camellia sinensis var. sinensis HOM05D005163 ORTHO05D006462 3.7e-230 801.6 457 84.7
DCAR_031672 Daucus carota HOM05D005163 ORTHO05D006462 1.1e-229 800.0 540 75.0
CDE04G3147 Ceratophyllum demersum HOM05D005163 ORTHO05D006462 9.2e-229 797.0 521 73.5
Os02g0100700 Oryza sativa ssp. japonica HOM05D005163 ORTHO05D006462 2.1e-228 795.8 546 71.4
Duzib187G1632 Durio zibethinus HOM05D005163 ORTHO05D006462 4.6e-228 794.7 540 73.5
BcaC06g33060 Brassica carinata HOM05D005163 ORTHO05D006462 2.3e-227 792.3 542 71.6
Zm00001eb228990 Zea mays HOM05D005163 ORTHO05D006462 8.6e-227 790.4 547 70.2
Dinv40040 Davidia involucrata HOM05D005163 ORTHO05D006462 1.2e-220 770.0 517 73.5
Cpa.g.sc6.195 Carica papaya HOM05D005163 ORTHO05D006462 1.7e-219 766.1 540 71.1
Gohir.D12G062000 Gossypium hirsutum HOM05D005163 ORTHO05D006462 2.9e-206 722.2 427 81.3
Mapoly0159s0016 Marchantia polymorpha HOM05D005163 ORTHO05D006462 2.1e-196 689.5 547 61.2
COL.COLO4_21984 Corchorus olitorius HOM05D005163 ORTHO05D006462 3.1e-192 675.6 483 70.8
Sabra05G0097300 Salix brachista HOM05D005163 ORTHO05D006462 8.2e-185 651.0 554 63.4
Pp3c2_36750 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.0e-179 632.5 548 57.3
Pp3c2_36751 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.0e-179 632.5 548 57.3
Pp3c2_37540 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.0e-179 632.5 550 57.1
Gohir.D11G186500 Gossypium hirsutum HOM05D005163 ORTHO05D006462 7.4e-178 627.9 427 71.9
SMO340G0175 Selaginella moellendorffii HOM05D005163 ORTHO05D006462 7.4e-178 627.9 543 56.9
Pp3c11_13530 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.9e-171 605.5 549 54.6
AagrBONN_evm.TU.Sc2ySwM_368.2341 Anthoceros agrestis HOM05D005163 ORTHO05D006462 1.8e-168 596.7 553 56.6
unitig_699.g19557 Utricularia gibba HOM05D005163 ORTHO05D006462 1.9e-149 533.5 376 70.2
vmacro17732 Vaccinium macrocarpon HOM05D005163 ORTHO05D006462 2.0e-138 496.9 316 77.5
CBR_g41477 Chara braunii HOM05D005163 ORTHO05D006462 5.4e-128 462.2 556 45.9
FAN26G0993 Fragaria x ananassa HOM05D005163 ORTHO05D006462 2.9e-113 413.3 233 84.1
Dinv33585 Davidia involucrata HOM05D005163 ORTHO05D006462 4.9e-105 386.0 248 75.4
MBI01_g27921_MAGBIO Magnolia biondii HOM05D005163 ORTHO05D006462 1.3e-97 361.3 344 57.6
MCO09G435 Micromonas commoda HOM05D005163 ORTHO05D006462 2.3e-86 323.9 629 35.8
C08p26360 Brassica napus HOM05D005163 ORTHO05D006462 1.3e-84 318.2 354 52.0
Cre07.g336050 Chlamydomonas reinhardtii HOM05D005163 ORTHO05D006462 1.3e-70 271.6 673 31.2
SHI08600 Sapria himalayana HOM05D005163 ORTHO05D006462 8.7e-70 268.9 165 77.0
BcaC07g39583 Brassica carinata HOM05D005163 ORTHO05D006462 5.7e-69 266.2 237 59.9
SEGI_33135 Sequoiadendron giganteum HOM05D005163 ORTHO05D006462 3.6e-47 193.7 127 70.9
Dinv33584 Davidia involucrata HOM05D005163 ORTHO05D006462 4.1e-43 180.3 96 89.6
BcaB05g23544 Brassica carinata HOM05D005163 ORTHO05D006462 1.2e-42 178.7 138 68.8
PRCOL_00007058 Prasinoderma coloniale HOM05D005163 ORTHO05D006462 3.6e-39 167.2 496 30.6
SEGI_18766 Sequoiadendron giganteum HOM05D005163 ORTHO05D006462 1.2e-37 162.2 117 66.7
BraA09t39874Z Brassica rapa HOM05D005163 ORTHO05D006462 3.5e-34 150.6 92 79.3
Sabra07G0015100 Salix brachista HOM05D005163 ORTHO05D006462 8.6e-33 146.0 75 90.7
vmacro17731 Vaccinium macrocarpon HOM05D005163 ORTHO05D006462 3.2e-32 144.1 76 88.2
Hma1.2p1_0913F.1_g236060 Hydrangea macrophylla HOM05D005163 ORTHO05D006462 3.4e-29 134.0 103 67.0
A09p44140 Brassica napus HOM05D005163 ORTHO05D006462 1.2e-26 125.6 110 58.2
Hund14017 Selenicereus undatus HOM05D005163 ORTHO05D006462 1.5e-24 118.6 76 71.1
BolC8t50252H Brassica oleracea HOM05D005163 ORTHO05D041294 3.4e-13 80.9 49 79.6
Dinv33586 Davidia involucrata HOM05D005163 ORTHO05D006462 9.8e-13 79.3 38 89.5
SHI08598 Sapria himalayana HOM05D005163 ORTHO05D006462 2.2e-12 78.2 86 47.7
C08p26350 Brassica napus HOM05D005163 ORTHO05D041294 2.9e-12 77.8 49 73.5
CDE12G0395 Ceratophyllum demersum HOM05D005163 ORTHO05D006462 8.3e-12 76.3 65 64.6
unitig_699.g19558 Utricularia gibba HOM05D005163 ORTHO05D006462 3.1e-06 57.8 25 96.0


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