Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 2.2e-265 918.3 441 100.0
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 3.1e-182 642.1 410 75.1
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 3.4e-165 585.5 434 66.8
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 9.7e-136 487.6 417 57.3
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 2.8e-135 486.1 423 58.4
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.7e-127 460.3 417 56.1
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 4.5e-125 452.2 417 54.2
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 5.9e-125 451.8 417 54.2
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.9e-123 446.8 462 51.5
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 6.1e-122 441.8 417 54.7
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 8.0e-122 441.4 437 51.0
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.3e-121 439.9 399 54.1
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 2.6e-120 436.4 412 53.2
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 5.7e-120 435.3 412 54.1
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 3.7e-119 432.6 421 53.2
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.8e-118 430.3 421 53.2
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 5.9e-117 425.2 420 50.7
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 1.3e-116 424.1 418 52.9
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 1.3e-116 424.1 418 52.4
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 8.6e-116 421.4 409 52.3
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 1.1e-115 421.0 410 54.4
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.5e-115 420.6 431 52.2
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 9.5e-115 417.9 420 50.7
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 2.1e-114 416.8 420 51.4
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 2.8e-114 416.4 420 50.7
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.8e-113 413.7 413 53.0
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 3.1e-113 412.9 411 53.3
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 6.8e-113 411.8 420 50.7
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.2e-112 411.0 414 52.4
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 2.0e-112 410.2 437 47.6
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 5.8e-112 408.7 417 51.1
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 2.2e-111 406.8 416 52.4
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.9e-111 406.4 413 52.3
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 4.9e-111 405.6 431 50.1
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 8.3e-111 404.8 418 50.5
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 4.1e-110 402.5 418 50.2
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 7.0e-110 401.7 445 47.4
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 1.6e-109 400.6 428 47.7
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 1.0e-108 397.9 419 50.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.3e-108 397.5 450 46.7
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.3e-108 397.5 412 50.0
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 8.6e-108 394.8 419 50.1
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 1.5e-107 394.0 413 49.6
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 9.5e-107 391.3 413 49.4
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 3.6e-106 389.4 437 48.7
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.1e-105 387.9 407 49.1
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 4.4e-104 382.5 366 53.0
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 2.9e-103 379.8 413 49.6
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 4.9e-103 379.0 446 49.3
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 1.6e-101 374.0 425 47.8
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 3.9e-100 369.4 370 49.7
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 3.3e-99 366.3 413 46.0
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 6.2e-98 362.1 357 51.3
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 2.3e-97 360.1 439 47.2
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 2.2e-95 353.6 414 44.7
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 1.1e-94 351.3 447 45.0
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 7.1e-94 348.6 439 44.4
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 3.5e-93 346.3 448 43.3
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 1.0e-92 344.7 420 44.0
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 3.9e-92 342.8 442 44.3
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 3.9e-92 342.8 424 44.3
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 5.6e-91 339.0 456 42.8
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.2e-90 337.8 440 42.0
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 1.1e-89 334.7 424 43.6
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.4e-89 333.6 409 44.7
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 8.9e-89 331.6 414 44.4
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 8.9e-89 331.6 424 43.4
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 3.4e-88 329.7 411 42.8
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.1e-86 324.7 457 41.6
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.4e-86 324.3 413 44.1
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 4.2e-86 322.8 408 43.6
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 5.1e-84 315.8 417 42.9
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 6.6e-84 315.5 405 43.0
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.5e-83 313.5 435 42.3
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 5.6e-83 312.4 409 44.0
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.6e-82 309.7 429 40.3
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 4.8e-82 309.3 426 41.5
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 6.2e-82 308.9 410 42.9
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 4.0e-81 306.2 410 43.9
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 2.9e-79 300.1 413 42.4
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 1.1e-78 298.1 422 41.0
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 3.2e-78 296.6 411 41.6
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.2e-77 294.7 407 41.5
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.2e-77 294.7 407 41.5
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.0e-77 292.4 450 38.2
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 7.9e-77 292.0 407 42.0
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.3e-76 291.2 407 41.3
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.7e-76 290.8 436 39.0
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 5.1e-76 289.3 409 43.3
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 2.5e-75 287.0 407 41.0
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 2.5e-75 287.0 407 41.0
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 9.6e-75 285.0 411 41.4
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 3.6e-74 283.1 408 41.9
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 5.3e-73 279.3 397 41.1
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 9.0e-73 278.5 437 39.4
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.9e-70 270.8 221 57.0
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.9e-70 270.8 414 40.3
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 6.0e-69 265.8 433 36.5
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 7.4e-67 258.8 413 37.8
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.5e-59 234.6 186 62.4
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.2e-46 189.9 141 66.7
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 4.8e-42 176.4 127 62.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 4.8e-42 176.4 459 28.1
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.4e-40 170.2 130 62.3
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 7.2e-38 162.5 141 56.7
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.5e-35 154.8 445 26.7
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 4.4e-35 153.3 430 28.8
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.5e-30 137.5 449 25.8
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 1.6e-29 134.8 354 29.7
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 1.5e-27 128.3 106 59.4
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 5.7e-27 126.3 114 50.0
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 5.5e-22 109.8 331 27.8
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.2e-14 84.0 74 52.7
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.3e-12 77.8 59 57.6
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.1e-09 68.9 75 50.7
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 4.1e-09 67.0 43 72.1


User provided reference genes

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