Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 7.1e-47 190.3 98 100.0
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 2.0e-28 129.0 98 76.5
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.7e-28 127.5 92 75.0
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.7e-28 127.5 92 75.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 7.4e-28 127.1 92 75.0
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.7e-27 125.9 100 76.0
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.7e-27 125.9 92 73.9
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.7e-27 125.9 92 73.9
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.2e-27 125.6 94 73.4
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 8.2e-27 123.6 95 72.6
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 3.1e-26 121.7 98 70.4
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.5e-25 119.4 93 71.0
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 2.0e-25 119.0 99 69.7
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 3.5e-25 118.2 98 69.4
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 3.8e-24 114.8 91 72.5
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.1e-23 113.2 95 68.4
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.1e-23 113.2 95 68.4
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.5e-23 112.8 100 68.0
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.5e-23 112.1 98 66.3
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 9.4e-23 110.2 98 66.3
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 1.2e-22 109.8 95 67.4
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.6e-22 109.4 98 67.3
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.7e-22 108.6 98 66.3
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 2.7e-22 108.6 98 66.3
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 4.7e-22 107.8 91 69.2
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.0e-21 106.7 98 62.2
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.0e-21 106.7 98 65.3
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 4.0e-21 104.8 92 66.3
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 5.2e-21 104.4 99 63.6
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 5.2e-21 104.4 98 62.2
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 6.7e-21 104.0 98 61.2
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 6.7e-21 104.0 98 61.2
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 6.7e-21 104.0 98 62.2
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 8.8e-21 103.6 93 65.6
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.1e-20 103.2 102 63.7
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.0e-20 102.4 98 58.2
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.6e-20 102.1 92 59.8
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 3.3e-20 101.7 101 62.4
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 4.4e-20 101.3 98 62.2
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.4e-20 101.3 98 61.2
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 7.4e-20 100.5 102 59.8
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 7.4e-20 100.5 87 67.8
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 9.7e-20 100.1 92 60.9
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 9.7e-20 100.1 87 67.8
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 1.3e-19 99.8 99 61.6
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.8e-19 98.6 87 67.8
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 4.8e-19 97.8 93 64.5
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 4.8e-19 97.8 92 60.9
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 8.2e-19 97.1 92 62.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 1.4e-18 96.3 94 60.6
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.8e-18 95.9 88 63.6
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 2.4e-18 95.5 96 60.4
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 2.4e-18 95.5 100 58.0
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 2.4e-18 95.5 96 56.2
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.4e-18 95.5 92 58.7
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 3.1e-18 95.1 93 60.2
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 4.1e-18 94.7 95 58.9
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 5.3e-18 94.4 88 62.5
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 7.0e-18 94.0 89 62.9
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 7.0e-18 94.0 84 66.7
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.0e-17 92.4 92 56.5
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.3e-16 89.7 93 57.0
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 2.9e-16 88.6 97 52.6
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.9e-16 88.6 92 55.4
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 2.9e-16 88.6 93 57.0
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.1e-15 86.7 87 57.5
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.5e-15 86.3 95 56.8
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 7.2e-15 84.0 58 81.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.2e-14 83.2 91 52.7
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 3.6e-14 81.6 95 48.4
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.0e-13 80.1 70 65.7
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.3e-13 79.0 64 68.8
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 4.0e-13 78.2 102 51.0
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 4.4e-12 74.7 90 54.4
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 6.5e-08 60.8 50 70.0
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 1.9e-07 59.3 88 45.5
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 1.2e-06 56.6 88 43.2


User provided reference genes

Program Settings