Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G042000 Carya illinoinensis HOM05D005322 ORTHO05D006746 1.2e-303 1045.8 562 100.0
Cfa006826 Carpinus fangiana HOM05D005322 ORTHO05D006746 5.5e-168 595.1 567 65.4
Haze_03937 Corylus avellana HOM05D005322 ORTHO05D006746 8.0e-167 591.3 569 65.6
QL06p037497 Quercus lobata HOM05D005322 ORTHO05D006746 1.2e-151 540.8 575 61.4
Prupe.6G210300 Prunus persica HOM05D005322 ORTHO05D006746 2.7e-98 363.6 587 45.0
TAR381G1522 Trochodendron aralioides HOM05D005322 ORTHO05D006746 1.5e-93 347.8 577 43.5
Dinv36981 Davidia involucrata HOM05D005322 ORTHO05D006746 4.2e-91 339.7 570 43.3
RcHm_v2.0_Chr2g0109931 Rosa chinensis HOM05D005322 ORTHO05D006746 1.6e-90 337.8 610 41.8
Thecc.01G083200 Theobroma cacao HOM05D005322 ORTHO05D006746 3.8e-84 316.6 561 42.6
MD15G1306300 Malus domestica HOM05D005322 ORTHO05D006746 1.4e-83 314.7 576 43.1
TWI74G0553 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 1.4e-83 314.7 566 40.5
Atru.chr3.1164 Acer truncatum HOM05D005322 ORTHO05D006746 2.1e-82 310.8 510 44.1
Ciclev10026033m.g Citrus clementina HOM05D005322 ORTHO05D006746 6.1e-82 309.3 309 57.6
Atru.chr3.1145 Acer truncatum HOM05D005322 ORTHO05D006746 1.0e-81 308.5 510 43.9
TWI77G0556 Tripterygium wilfordii HOM05D005322 ORTHO05D006746 1.0e-81 308.5 559 41.3
FvH4_1g18920 Fragaria vesca HOM05D005322 ORTHO05D006746 2.5e-80 303.9 588 40.6
FAN19G2338 Fragaria x ananassa HOM05D005322 ORTHO05D006746 9.7e-80 302.0 588 40.5
MD01G1045600 Malus domestica HOM05D005322 ORTHO05D006746 4.8e-79 299.7 580 41.7
Duzib264G0018 Durio zibethinus HOM05D005322 ORTHO05D006746 6.3e-79 299.3 476 44.7
Nn5g29007 Nelumbo nucifera HOM05D005322 ORTHO05D006746 6.9e-78 295.8 666 36.6
Potri.018G000700 Populus trichocarpa HOM05D005322 ORTHO05D006746 5.9e-77 292.7 368 51.4
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla HOM05D005322 ORTHO05D006746 1.0e-76 292.0 595 40.2
CSS0043740 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.2e-76 290.8 639 38.5
CSS0004865 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 2.9e-76 290.4 639 38.5
Manes.13G104500 Manihot esculenta HOM05D005322 ORTHO05D006746 2.9e-76 290.4 478 42.9
Potri.006G280800 Populus trichocarpa HOM05D005322 ORTHO05D006746 3.8e-76 290.0 311 55.3
Manes.12G121000 Manihot esculenta HOM05D005322 ORTHO05D006746 6.5e-76 289.3 484 42.6
FAN28G0408 Fragaria x ananassa HOM05D005322 ORTHO05D006746 3.2e-75 287.0 586 41.0
Duzib147G0396 Durio zibethinus HOM05D005322 ORTHO05D006746 1.2e-74 285.0 465 44.3
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 7.9e-74 282.3 304 55.9
CSS0048225 Camellia sinensis var. sinensis HOM05D005322 ORTHO05D006746 1.4e-73 281.6 470 44.5
Gohir.A11G049800 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.8e-73 281.2 299 55.5
Gorai.003G035800 Gossypium raimondii HOM05D005322 ORTHO05D006746 1.8e-73 281.2 467 43.5
ClCG01G018150 Citrullus lanatus HOM05D005322 ORTHO05D006746 8.8e-73 278.9 584 39.0
Gorai.007G058000 Gossypium raimondii HOM05D005322 ORTHO05D006746 8.8e-73 278.9 281 55.9
Lalb_Chr05g0216181 Lupinus albus HOM05D005322 ORTHO05D006746 2.6e-72 277.3 510 42.5
Gohir.D11G053300 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.7e-71 274.6 281 55.5
Nn4g23001 Nelumbo nucifera HOM05D005322 ORTHO05D006746 1.7e-71 274.6 671 35.8
CANSAT11G0958 Cannabis sativa HOM05D005322 ORTHO05D006746 2.8e-71 273.9 491 40.9
Cpa.g.sc129.20 Carica papaya HOM05D005322 ORTHO05D006746 2.8e-71 273.9 297 56.2
Glyma.01G019600 Glycine max HOM05D005322 ORTHO05D006746 2.8e-71 273.9 295 54.6
MELO3C007693.2 Cucumis melo HOM05D005322 ORTHO05D006746 6.9e-70 269.2 586 39.8
Gohir.D03G034100 Gossypium hirsutum HOM05D005322 ORTHO05D006746 1.2e-69 268.5 550 38.5
FAN23G1375 Fragaria x ananassa HOM05D005322 ORTHO05D006746 1.5e-69 268.1 440 43.2
CsaV3_6G044720 Cucumis sativus L. HOM05D005322 ORTHO05D006746 2.0e-69 267.7 588 38.8
Rhsim07G0215300 Rhododendron simsii HOM05D005322 ORTHO05D006746 7.7e-69 265.8 301 52.5
Sed0015871 Sechium edule HOM05D005322 ORTHO05D006746 1.1e-67 261.9 462 43.7
Lj2g0022469 Lotus japonicus HOM05D005322 ORTHO05D006746 2.5e-67 260.8 464 41.2
Gohir.A02G146400 Gossypium hirsutum HOM05D005322 ORTHO05D006746 2.1e-66 257.7 420 43.3
PSO761G0065 Papaver somniferum HOM05D005322 ORTHO05D006746 1.8e-65 254.6 297 49.8
PSO210G4083 Papaver somniferum HOM05D005322 ORTHO05D006746 3.0e-65 253.8 385 43.1
Phvul.002G142700 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 3.9e-65 253.4 607 36.6
Oeu030825.1 Olea europaea HOM05D005322 ORTHO05D006746 6.7e-65 252.7 363 45.2
Ca_25206_v3 Cicer arietinum L. HOM05D005322 ORTHO05D006746 1.5e-64 251.5 405 44.0
Aqoxy5G02272 Aquilegia oxysepala HOM05D005322 ORTHO05D006746 1.7e-63 248.1 482 37.3
CAN.G179.11 Capsicum annuum HOM05D005322 ORTHO05D006746 2.8e-63 247.3 453 40.4
vmacro11204 Vaccinium macrocarpon HOM05D005322 ORTHO05D006746 4.8e-63 246.5 411 42.6
Psat2g134960 Pisum sativum HOM05D005322 ORTHO05D006746 6.3e-63 246.1 391 46.0
HanXRQChr12g0355811 Helianthus annuus HOM05D005322 ORTHO05D006746 8.2e-63 245.7 378 43.7
Nitab4.5_0002103g0070 Nicotiana tabacum HOM05D005322 ORTHO05D006746 3.1e-62 243.8 454 39.9
Oeu050977.1 Olea europaea HOM05D005322 ORTHO05D006746 3.1e-62 243.8 363 44.9
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea HOM05D005322 ORTHO05D006746 4.1e-62 243.4 292 50.3
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea HOM05D005322 ORTHO05D006746 4.1e-62 243.4 292 50.3
Ah.02g129230 Amaranthus hybridus HOM05D005322 ORTHO05D006746 7.0e-62 242.7 305 49.2
Lj5A206G51 Lonicera japonica HOM05D005322 ORTHO05D006746 1.2e-61 241.9 572 37.2
AUR62044121 Chenopodium quinoa HOM05D005322 ORTHO05D006746 2.0e-61 241.1 296 50.0
Sc22g0002020 Simmondsia chinensis HOM05D005322 ORTHO05D006746 2.6e-61 240.7 317 49.5
Hund25262 Selenicereus undatus HOM05D005322 ORTHO05D006746 7.7e-61 239.2 297 49.8
THA.LOC104807095 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 7.7e-61 239.2 299 48.8
Glyma.09G203100 Glycine max HOM05D005322 ORTHO05D006746 1.0e-60 238.8 566 36.9
Phvul.010G030900 Phaseolus vulgaris HOM05D005322 ORTHO05D006746 1.3e-60 238.4 442 41.2
TPR.G30490 Trifolium pratense HOM05D005322 ORTHO05D006746 8.5e-60 235.7 400 41.0
Medtr7g076850 Medicago truncatula HOM05D005322 ORTHO05D006746 1.1e-59 235.3 497 38.4
MBI16_g26241_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 1.9e-59 234.6 350 43.4
ECA238G4016 Erigeron canadensis HOM05D005322 ORTHO05D006746 5.5e-59 233.0 297 46.1
Cc07_g07800 Coffea canephora HOM05D005322 ORTHO05D006746 9.4e-59 232.3 288 49.3
Sopen01g030500 Solanum pennellii HOM05D005322 ORTHO05D006746 1.6e-58 231.5 290 48.3
AUR62002656 Chenopodium quinoa HOM05D005322 ORTHO05D006746 2.1e-58 231.1 311 47.3
Actinidia11927 Actinidia chinensis HOM05D005322 ORTHO05D006746 3.6e-58 230.3 361 44.9
ECA238G0277 Erigeron canadensis HOM05D000009 ORTHO05D000008 6.1e-58 229.6 426 37.8
Medtr5g030750 Medicago truncatula HOM05D005322 ORTHO05D006746 8.0e-58 229.2 422 42.7
Aa31LG6G14810 Aethionema arabicum HOM05D005322 ORTHO05D006746 2.3e-57 227.6 532 36.5
Migut.F01569 Erythranthe guttata HOM05D005322 ORTHO05D006746 8.8e-57 225.7 610 35.1
Psat5g132240 Pisum sativum HOM05D005322 ORTHO05D006746 2.0e-56 224.6 467 39.6
ECA232G1574 Erigeron canadensis HOM05D005322 ORTHO05D006746 5.7e-56 223.0 448 39.5
THA.LOC104807657 Tarenaya hassleriana HOM05D005322 ORTHO05D006746 5.7e-56 223.0 414 40.6
Peaxi162Scf00309g00413 Petunia axillaris HOM05D005322 ORTHO05D006746 9.7e-56 222.2 398 40.5
Lsat_1_v5_gn_2_82180 Lactuca sativa HOM05D005322 ORTHO05D006746 1.7e-55 221.5 282 48.6
Thhalv10010289m.g Eutrema salsugineum HOM05D005322 ORTHO05D006746 6.3e-55 219.5 479 38.4
EL10Ac6g13300 Beta vulgaris HOM05D005322 ORTHO05D006746 1.1e-54 218.8 489 38.2
Solyc01g068540.3 Solanum lycopersicum HOM05D005322 ORTHO05D006746 2.4e-54 217.6 454 37.4
GSVIVG01008306001 Vitis vinifera HOM05D005322 ORTHO05D006746 1.0e-52 212.2 509 36.9
Sp5g08900 Schrenkiella parvula HOM05D005322 ORTHO05D006746 2.9e-52 210.7 279 48.0
MSTRG.8297 Avicennia marina HOM05D005322 ORTHO05D006746 1.9e-51 208.0 605 32.4
Nitab4.5_0001888g0010 Nicotiana tabacum HOM05D005322 ORTHO05D006746 3.2e-51 207.2 252 49.2
PGR031G1473 Punica granatum HOM05D005322 ORTHO05D006746 2.7e-50 204.1 421 40.4
SGA_v2.0_scaffold76G25043 Striga asiatica HOM05D005322 ORTHO05D006746 2.7e-50 204.1 604 31.5
Carub.0005s2001 Capsella rubella HOM05D005322 ORTHO05D006746 3.6e-50 203.8 488 37.1
CARHR163340 Cardamine hirsuta HOM05D005322 ORTHO05D006746 3.0e-49 200.7 491 35.8
AT3G53440 Arabidopsis thaliana HOM05D005322 ORTHO05D006746 2.0e-48 198.0 278 47.1
AL5G34360 Arabidopsis lyrata HOM05D005322 ORTHO05D006746 1.7e-47 194.9 504 36.9
C08p28800 Brassica napus HOM05D005322 ORTHO05D006746 8.3e-47 192.6 437 37.1
A09p46440 Brassica napus HOM05D005322 ORTHO05D006746 1.4e-46 191.8 307 43.6
BraA09t40109Z Brassica rapa HOM05D005322 ORTHO05D006746 1.4e-46 191.8 307 43.6
BcaB01g00273 Brassica carinata HOM05D005322 ORTHO05D006746 2.4e-46 191.0 469 36.0
BcaB01g00278 Brassica carinata HOM05D005322 ORTHO05D006746 1.3e-44 185.3 490 36.1
BolC8t50481H Brassica oleracea HOM05D005322 ORTHO05D006746 1.3e-44 185.3 490 36.1
SalBow6G3962 Salvia bowleyana HOM05D005322 ORTHO05D006746 1.6e-42 178.3 289 42.2
Zm00001eb297530 Zea mays HOM05D005322 ORTHO05D006746 3.0e-41 174.1 283 39.9
HPP92_000395 Vanilla planifolia HOM05D005322 ORTHO05D006746 1.2e-40 172.2 292 41.8
Nitab4.5_0008618g0020 Nicotiana tabacum HOM05D005322 ORTHO05D006746 2.6e-40 171.0 201 49.8
PGSC0003DMG400000839 Solanum tuberosum HOM05D000365 ORTHO05D000154 4.9e-39 166.8 382 35.1
DCAR_025854 Daucus carota HOM05D005322 ORTHO05D006746 2.4e-38 164.5 251 46.2
Zm00001eb345110 Zea mays HOM05D005322 ORTHO05D006746 1.0e-36 159.1 283 39.2
CDE01G0382 Ceratophyllum demersum HOM05D005322 ORTHO05D006746 2.1e-34 151.4 258 39.5
SHI12143 Sapria himalayana HOM05D005322 ORTHO05D006746 4.7e-34 150.2 228 42.5
Actinidia36382 Actinidia chinensis HOM05D005322 ORTHO05D006746 5.2e-33 146.7 445 31.0
VMungo0464G0122 Vigna mungo HOM05D000074 ORTHO05D006746 3.4e-32 144.1 255 42.0
SEGI_16708 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 1.0e-25 122.5 288 33.7
unitig_62.g23938 Utricularia gibba HOM05D005322 ORTHO05D006746 6.8e-25 119.8 293 34.1
Rhsim10G0081400 Rhododendron simsii HOM05D005322 ORTHO05D006746 4.4e-24 117.1 505 29.1
SEGI_41064 Sequoiadendron giganteum HOM05D005322 ORTHO05D006746 1.5e-19 102.1 268 34.0
ATR0807G165 Amborella trichopoda HOM05D005322 ORTHO05D006746 7.3e-19 99.8 349 29.2
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis HOM05D005322 ORTHO05D006746 3.1e-17 94.4 248 31.5
Zm00001eb345140 Zea mays HOM05D005322 ORTHO05D006746 2.9e-15 87.8 276 27.5
MBI16_g31813_MAGBIO Magnolia biondii HOM05D005322 ORTHO05D006746 2.1e-13 81.6 170 37.6
Mapoly0062s0031 Marchantia polymorpha HOM05D005322 ORTHO05D006746 2.3e-09 68.2 459 24.6
VMungo1215G2194 Vigna mungo HOM05D005322 ORTHO05D006746 4.0e-09 67.4 43 72.1
TAR625G0743 Trochodendron aralioides HOM05D005322 ORTHO05D006746 1.5e-08 65.5 89 49.4
Actinidia36381 Actinidia chinensis HOM05D005322 ORTHO05D006746 5.8e-08 63.5 80 51.2
Sabra18G0005500 Salix brachista HOM05D005322 ORTHO05D006746 1.7e-07 62.0 103 38.8
Cre14.g624600 Chlamydomonas reinhardtii HOM05D005322 ORTHO05D006746 3.2e-06 57.8 65 44.6


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