Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G033300 Carya illinoinensis HOM05D009264 ORTHO05D009202 9.3e-52 206.8 124 100.0
CiPaw.07G033600 Carya illinoinensis HOM05D009264 ORTHO05D009202 8.5e-29 130.6 118 73.7
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 4.8e-16 88.2 128 57.8
Haze_04025 Corylus avellana HOM05D009264 ORTHO05D009202 1.0e-13 80.5 108 62.0
Cfa006734 Carpinus fangiana HOM05D009264 ORTHO05D009202 2.2e-13 79.3 136 55.1
FAN09G1104 Fragaria x ananassa HOM05D009264 ORTHO05D009202 9.4e-12 73.9 122 49.2
FAN02G1552 Fragaria x ananassa HOM05D009264 ORTHO05D009202 1.8e-10 69.7 122 50.0
RcHm_v2.0_Chr3g0457951 Rosa chinensis HOM05D009264 ORTHO05D009202 8.8e-10 67.4 127 44.1
Thecc.05G327000 Theobroma cacao HOM05D021022 ORTHO05D009202 8.8e-10 67.4 134 51.5
FvH4_6g08100 Fragaria vesca HOM05D009264 ORTHO05D009202 5.7e-09 64.7 129 43.4
FAN14G2966 Fragaria x ananassa HOM05D009264 ORTHO05D009202 5.7e-09 64.7 129 43.4
FAN05G0864 Fragaria x ananassa HOM05D009264 ORTHO05D009202 9.8e-09 63.9 99 45.5
Duzib128G1262 Durio zibethinus HOM05D021022 ORTHO05D009202 1.3e-08 63.5 122 52.5
CSS0022072 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 2.2e-08 62.8 124 41.9
Potri.005G006000 Populus trichocarpa HOM05D014622 ORTHO05D009202 2.2e-08 62.8 133 48.9
Hma1.2p1_0052F.1_g030560 Hydrangea macrophylla HOM05D009264 ORTHO05D009202 2.8e-08 62.4 143 38.5
Potri.005G006200 Populus trichocarpa HOM05D014622 ORTHO05D009202 3.7e-08 62.0 132 49.2
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 8.3e-08 60.8 82 52.4
CSS0039740 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 1.1e-07 60.5 124 41.1
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 1.4e-07 60.1 102 45.1
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 1.8e-07 59.7 99 42.4
Nn3g21851 Nelumbo nucifera HOM05D008325 ORTHO05D010336 2.4e-07 59.3 99 44.4
Phvul.001G223400 Phaseolus vulgaris HOM05D011874 ORTHO05D009202 2.4e-07 59.3 144 36.8
QL03p008780 Quercus lobata HOM05D009264 ORTHO05D009202 2.4e-07 59.3 103 44.7
QL03p013046 Quercus lobata HOM05D009264 ORTHO05D009202 2.4e-07 59.3 103 44.7
VMungo1383G0753 Vigna mungo HOM05D011874 ORTHO05D009202 3.1e-07 58.9 146 39.0
Actinidia16886 Actinidia chinensis HOM05D009264 ORTHO05D009202 7.0e-07 57.8 126 46.8
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 7.0e-07 57.8 111 40.5
Potri.013G005300 Populus trichocarpa HOM05D014622 ORTHO05D009202 2.0e-06 56.2 128 43.0
Gohir.A13G177100 Gossypium hirsutum HOM05D021022 ORTHO05D009202 3.5e-06 55.5 142 45.1
TAR633G2549 Trochodendron aralioides HOM05D009264 ORTHO05D009202 3.5e-06 55.5 124 41.1
Aqoxy2G02597 Aquilegia oxysepala HOM05D009264 ORTHO05D009202 4.5e-06 55.1 126 35.7
Lj1g0011687 Lotus japonicus HOM05D011874 ORTHO05D009202 4.5e-06 55.1 113 37.2
RcHm_v2.0_Chr3g0457921 Rosa chinensis HOM05D009264 ORTHO05D009202 4.5e-06 55.1 138 42.0
Manes.08G109000 Manihot esculenta HOM05D009264 ORTHO05D009202 5.9e-06 54.7 132 44.7
Medtr7g111770 Medicago truncatula HOM05D011874 ORTHO05D009202 5.9e-06 54.7 114 36.8


User provided reference genes

Program Settings