Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.9e-50 201.1 166 100.0
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.4e-48 194.1 166 88.6
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.8e-40 168.7 165 84.8
CiPaw.04G185500 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.0e-34 148.7 85 85.9
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.3e-28 129.0 87 71.3
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.7e-28 128.3 175 74.3
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.2e-27 124.8 60 93.3
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.2e-27 124.8 175 73.1
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.2e-27 124.4 172 66.3
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.8e-26 123.2 167 63.5
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.9e-26 121.3 172 65.7
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.6e-25 119.4 89 66.3
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.5e-25 118.6 80 71.2
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-24 117.1 89 65.2
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-24 116.7 89 65.2
CiPaw.01G280200 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.5e-24 114.8 85 62.4
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.5e-24 114.8 81 67.9
CiPaw.03G153800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-23 113.2 85 64.7
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.5e-20 102.8 75 62.7
CiPaw.15G141100 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.0e-18 94.4 57 70.2
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.5e-16 87.8 79 54.4
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.4e-13 80.5 78 53.8
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.4e-12 74.7 78 51.3
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 3.4e-09 65.9 60 46.7
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.4e-09 65.9 50 50.0
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 1.0e-08 64.3 63 46.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 5.0e-08 62.0 49 55.1
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 6.5e-08 61.6 50 56.0
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 1.1e-07 60.8 71 36.6
TPR.G13864 Trifolium pratense HOM05D019053 ORTHO05D020883 1.4e-07 60.5 91 35.2
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-07 60.1 55 49.1
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.5e-07 59.7 55 49.1
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 59.3 49 55.1
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 59.3 49 55.1
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 59.3 49 55.1
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 59.3 49 55.1
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.2e-07 59.3 49 55.1
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-07 58.5 55 47.3
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-07 58.5 55 47.3
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-07 58.5 55 47.3
CiPaw.16G028500 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.2e-07 58.2 54 46.3
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 7.2e-07 58.2 55 47.3
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 7.2e-07 58.2 60 50.0
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 9.4e-07 57.8 53 49.1
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 9.4e-07 57.8 49 51.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-06 57.4 60 50.0
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-06 57.4 52 50.0
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.2e-06 57.4 49 53.1
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 1.6e-06 57.0 71 43.7
CiPaw.05G170400 Carya illinoinensis HOM05D000059 ORTHO05D000128 1.6e-06 57.0 57 47.4
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-06 57.0 80 42.5
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 49 53.1
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 49 53.1
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 1.6e-06 57.0 49 53.1
Rhsim02G0156200 Rhododendron simsii HOM05D020684 ORTHO05D000309 1.6e-06 57.0 41 56.1
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.6 80 42.5
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-06 56.6 80 42.5
VMungo0720G1615 Vigna mungo HOM05D008573 ORTHO05D009911 2.1e-06 56.6 61 45.9
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 2.7e-06 56.2 60 46.7
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-06 56.2 55 45.5
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 56.2 49 53.1
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 2.7e-06 56.2 49 53.1
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 2.7e-06 56.2 66 39.4
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 3.6e-06 55.8 60 43.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-06 55.8 76 42.1
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.8 47 53.2
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.8 53 50.9
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.8 49 51.0
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 4.7e-06 55.5 55 49.1
Cfa010691 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.1e-06 55.1 57 42.1
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 6.1e-06 55.1 76 42.1
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 6.1e-06 55.1 55 45.5
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 6.1e-06 55.1 80 42.5
CANSAT54G0644 Cannabis sativa HOM05D015495 ORTHO05D024749 7.9e-06 54.7 73 37.0
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 7.9e-06 54.7 53 49.1


User provided reference genes

Program Settings