Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 5.9e-14 80.5 63 100.0
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 2.3e-10 68.6 31 83.9
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 3.9e-10 67.8 30 86.7
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 1.7e-08 62.4 30 76.7
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 2.2e-08 62.0 29 79.3
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 2.2e-08 62.0 30 80.0
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 2.2e-08 62.0 29 79.3
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 3.7e-08 61.2 30 80.0
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 4.8e-08 60.8 27 81.5
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.8e-08 60.8 28 85.7
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 4.8e-08 60.8 28 85.7
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 1.1e-07 59.7 28 75.0
FvH4_6g04120 Fragaria vesca HOM05D010912 ORTHO05D009926 1.8e-07 58.9 27 85.2
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 2.4e-07 58.5 30 70.0
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 2.4e-07 58.5 30 70.0
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 2.4e-07 58.5 30 70.0
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 2.4e-07 58.5 28 78.6
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 3.1e-07 58.2 35 62.9
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 4.1e-07 57.8 30 73.3
MD04G1216300 Malus domestica HOM05D010912 ORTHO05D009926 4.1e-07 57.8 27 81.5
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 5.3e-07 57.4 28 78.6
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 9.1e-07 56.6 26 84.6
FAN05G5084 Fragaria x ananassa HOM05D010912 ORTHO05D009926 9.1e-07 56.6 26 84.6
vmacro14967 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 9.1e-07 56.6 30 73.3
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 1.5e-06 55.8 28 75.0
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 2.0e-06 55.5 39 61.5
Thhalv10001693m.g Eutrema salsugineum HOM05D008278 ORTHO05D009926 2.6e-06 55.1 35 62.9
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 2.6e-06 55.1 33 69.7
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 2.6e-06 55.1 34 67.6
Carub.0004s3061 Capsella rubella HOM05D008278 ORTHO05D009926 3.4e-06 54.7 29 72.4
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 3.4e-06 54.7 30 70.0
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 3.4e-06 54.7 27 77.8
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 4.5e-06 54.3 29 72.4
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 4.5e-06 54.3 39 66.7
vmacro08204 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 7.7e-06 53.5 32 68.8


User provided reference genes

Program Settings