Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G009700 Carya illinoinensis HOM05D009433 ORTHO05D010667 5.9e-200 700.7 354 100.0
CiPaw.07G009500 Carya illinoinensis HOM05D009433 ORTHO05D010667 4.5e-91 339.0 282 67.7
CiPaw.08G177600 Carya illinoinensis HOM05D009433 ORTHO05D010667 5.4e-36 156.0 392 36.2
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 8.9e-31 138.7 310 36.1
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 4.4e-30 136.3 283 37.1
Cfa006491 Carpinus fangiana HOM05D009433 ORTHO05D010667 7.8e-27 125.6 177 49.2
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 4.3e-25 119.8 329 33.1
Haze_04298 Corylus avellana HOM05D009433 ORTHO05D010667 7.3e-25 119.0 437 30.7
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 8.1e-24 115.5 254 34.3
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 1.3e-21 108.2 238 37.4
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 1.3e-21 108.2 344 32.3
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 8.4e-21 105.5 449 26.7
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 5.4e-20 102.8 325 28.9
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 7.1e-20 102.4 301 35.9
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 1.1e-17 95.1 315 28.9
Prupe.6G336600 Prunus persica HOM05D014796 ORTHO05D010667 5.6e-17 92.8 276 34.1
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 9.6e-17 92.0 279 34.4
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 3.6e-16 90.1 287 30.7
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 3.6e-16 90.1 284 29.9
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.8e-15 87.8 237 33.8
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 6.9e-15 85.9 378 26.5
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 1.2e-14 85.1 304 30.9
Gorai.013G202300 Gossypium raimondii HOM05D009433 ORTHO05D010667 2.6e-14 84.0 344 26.2
Gohir.D13G176900 Gossypium hirsutum HOM05D009433 ORTHO05D010667 5.8e-14 82.8 344 25.6
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 3.2e-12 77.0 257 32.7
QL03p001021 Quercus lobata HOM05D009433 ORTHO05D010667 5.4e-12 76.3 102 46.1
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 2.1e-11 74.3 311 29.9
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 1.7e-10 71.2 149 34.9
Haze_20392 Corylus avellana HOM05D009433 ORTHO05D010667 5.1e-10 69.7 82 52.4
Gohir.A13G171500 Gossypium hirsutum HOM05D009433 ORTHO05D010667 5.1e-10 69.7 359 24.2
COL.COLO4_13630 Corchorus olitorius HOM05D009433 ORTHO05D010667 1.5e-09 68.2 393 26.2
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 2.5e-09 67.4 153 33.3
Duzib128G0350 Durio zibethinus HOM05D009433 ORTHO05D010667 5.6e-09 66.2 212 33.0
Nn4g26003 Nelumbo nucifera HOM05D009433 ORTHO05D010667 1.6e-08 64.7 193 31.1
QL03p001016 Quercus lobata HOM05D009433 ORTHO05D010667 3.6e-08 63.5 366 24.0
CANSAT54G0114 Cannabis sativa HOM05D009433 ORTHO05D010667 2.4e-07 60.8 131 35.9
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 4.0e-07 60.1 281 29.9
MD12G1233400 Malus domestica HOM05D014796 ORTHO05D010667 5.3e-07 59.7 207 32.4
CSS0037342 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.5e-06 58.2 269 28.6
Prupe.6G336700 Prunus persica HOM05D014796 ORTHO05D010667 4.5e-06 56.6 178 29.2


User provided reference genes

Program Settings