Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 9.0e-47 189.9 94 100.0
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.3e-21 106.3 123 53.7
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.6e-16 89.4 132 50.8
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.5e-14 82.8 120 46.7
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.6e-14 82.0 113 52.2
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.7e-13 79.3 124 44.4
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 2.2e-13 79.0 113 48.7
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.2e-13 79.0 113 48.7
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.1e-12 76.6 112 44.6
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.5e-12 75.5 111 46.8
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.2e-12 75.1 112 47.3
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.2e-12 75.1 113 45.1
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.2e-12 75.1 118 42.4
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 5.5e-12 74.3 103 51.5
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 5.5e-12 74.3 111 48.6
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 9.4e-12 73.6 122 41.0
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 9.4e-12 73.6 109 45.0
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.6e-11 72.8 113 46.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.6e-11 72.8 129 41.9
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 4.6e-11 71.2 108 46.3
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 4.6e-11 71.2 108 46.3
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.6e-11 71.2 97 46.4
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 7.9e-11 70.5 130 40.0
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 1.0e-10 70.1 121 42.1
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.0e-10 70.1 102 46.1
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.0e-10 70.1 92 45.7
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.4e-10 69.7 119 42.0
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.3e-10 68.9 107 44.9
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 2.3e-10 68.9 122 43.4
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 3.0e-10 68.6 128 43.0
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 5.1e-10 67.8 109 42.2
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 5.1e-10 67.8 113 43.4
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 6.7e-10 67.4 127 39.4
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.7e-10 67.4 121 41.3
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 6.7e-10 67.4 125 40.0
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 6.7e-10 67.4 126 39.7
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 8.8e-10 67.0 125 41.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.1e-09 66.6 124 46.0
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.1e-09 66.6 97 46.4
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.5e-09 66.2 126 41.3
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 2.0e-09 65.9 123 41.5
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 2.0e-09 65.9 125 39.2
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.5e-09 65.5 126 37.3
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 9.7e-09 63.5 123 37.4
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 9.7e-09 63.5 118 38.1
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.3e-08 63.2 108 43.5
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.3e-08 63.2 122 40.2
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.7e-08 62.8 118 38.1
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 1.7e-08 62.8 126 38.9
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.2e-08 62.4 92 44.6
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.2e-08 62.4 92 44.6
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 2.8e-08 62.0 93 44.1
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 2.8e-08 62.0 105 41.0
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 3.7e-08 61.6 101 44.6
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 4.8e-08 61.2 79 50.6
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 4.8e-08 61.2 92 44.6
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 4.8e-08 61.2 101 44.6
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.8e-07 59.3 126 37.3
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 1.8e-07 59.3 114 37.7
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.4e-07 58.9 39 74.4
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 3.1e-07 58.5 127 38.6
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 6.9e-07 57.4 118 38.1
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.2e-06 56.6 48 58.3
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.5e-06 56.2 100 42.0
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 2.0e-06 55.8 112 36.6
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.0e-06 55.8 103 41.7
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 2.6e-06 55.5 118 39.0
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 5.9e-06 54.3 93 37.6


User provided reference genes

Program Settings