Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 6.8e-204 713.8 359 100.0
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.1e-79 299.7 371 51.8
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 4.4e-78 295.8 372 52.2
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 6.6e-74 282.0 366 50.3
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.4e-47 194.5 398 37.4
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 7.9e-35 152.1 353 35.7
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.3e-34 150.6 397 31.5
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 4.8e-32 142.9 393 32.3
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.5e-30 137.9 367 30.5
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.6e-30 137.1 354 32.5
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 5.9e-30 136.0 390 31.3
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.7e-29 134.4 373 30.8
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.2e-29 134.0 364 33.5
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 6.1e-27 125.9 378 29.4
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 6.1e-27 125.9 359 31.5
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 3.0e-26 123.6 352 32.4
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.5e-25 120.6 379 31.9
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 7.4e-25 119.0 376 29.8
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.3e-24 118.2 379 29.8
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.7e-24 117.9 368 29.1
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.7e-24 117.9 368 29.1
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.8e-24 117.1 380 29.2
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.3e-24 115.9 368 28.0
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 2.4e-23 114.0 367 28.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 6.9e-23 112.5 366 26.8
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 2.6e-22 110.5 378 28.6
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.4e-22 110.2 359 27.9
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 4.5e-22 109.8 375 26.9
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.0e-21 108.6 404 28.2
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.7e-21 107.8 362 32.9
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.9e-21 107.1 148 44.6
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 5.0e-21 106.3 380 30.0
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 8.5e-21 105.5 369 27.9
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.9e-20 104.4 370 28.6
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 2.7e-19 100.5 394 27.9
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 3.6e-19 100.1 366 27.6
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.0e-18 98.6 377 27.6
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.4e-18 98.2 355 28.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 3.0e-18 97.1 401 28.4
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.1e-18 96.3 372 29.0
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 2.0e-17 94.4 370 25.7
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 9.7e-17 92.0 235 36.2
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.7e-16 91.3 362 28.7
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.7e-16 91.3 368 29.3
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 2.2e-16 90.9 369 29.3
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.8e-16 90.5 366 27.9
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 2.8e-16 90.5 369 27.9
VMungo1215G3202 Vigna mungo HOM05D023496 ORTHO05D025628 4.8e-16 89.7 366 26.2
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.3e-16 89.4 366 27.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 6.3e-16 89.4 361 27.4
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 8.2e-16 89.0 109 45.0
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 8.2e-16 89.0 378 26.5
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.4e-15 88.2 391 26.1
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.8e-15 87.8 354 28.2
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 1.8e-15 87.8 370 26.5
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.4e-15 87.4 352 28.1
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.4e-15 87.4 367 28.6
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 2.4e-15 87.4 379 28.5
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 4.1e-15 86.7 363 28.4
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.1e-15 86.7 222 34.2
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.5e-14 84.7 363 25.3
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 2.0e-14 84.3 360 26.9
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.5e-14 83.6 349 26.9
Glyma.11G002500 Glycine max HOM05D023496 ORTHO05D025628 3.5e-14 83.6 370 28.6
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 5.9e-14 82.8 356 25.6
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.0e-13 82.0 385 26.0
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 1.3e-13 81.6 357 26.3
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.3e-13 81.6 356 27.8
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.3e-13 81.6 375 25.6
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.7e-13 81.3 356 27.8
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-13 81.3 381 27.8
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.2e-13 80.9 356 27.8
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 3.8e-13 80.1 372 23.9
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 6.5e-13 79.3 368 22.8
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 8.5e-13 79.0 363 27.5
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 8.5e-13 79.0 342 28.7
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 1.1e-12 78.6 367 28.1
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.1e-12 78.6 373 27.6
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.1e-12 78.6 373 27.6
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.5e-12 78.2 381 24.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.5e-12 77.4 383 26.1
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 2.5e-12 77.4 352 24.4
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.2e-12 77.0 188 30.9
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.5e-12 76.3 376 25.0
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 7.2e-12 75.9 356 24.4
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 9.4e-12 75.5 305 29.2
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 9.4e-12 75.5 385 26.8
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.7e-11 73.9 193 26.4
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 8.0e-11 72.4 138 34.1
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 8.0e-11 72.4 362 23.8
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 8.0e-11 72.4 122 34.4
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.8e-10 71.2 371 23.7
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.3e-10 70.9 384 25.5
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 6.7e-10 69.3 116 37.1
Phvul.002G050800 Phaseolus vulgaris HOM05D023496 ORTHO05D025628 6.7e-10 69.3 362 24.6
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.1e-09 68.6 374 24.1
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.0e-09 67.8 175 33.1
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 7.4e-09 65.9 353 25.5
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 9.7e-09 65.5 112 32.1
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 9.7e-09 65.5 345 24.6
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 2.2e-08 64.3 292 25.7
Gohir.D13G046200 Gossypium hirsutum HOM05D016697 ORTHO05D018163 1.4e-07 61.6 350 23.7
Gorai.013G051900 Gossypium raimondii HOM05D016697 ORTHO05D018163 4.1e-07 60.1 352 23.6
Gohir.A13G047850 Gossypium hirsutum HOM05D016697 ORTHO05D018163 5.3e-07 59.7 350 22.9
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 1.6e-06 58.2 166 28.9
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.6e-06 58.2 374 24.3
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.0e-06 57.8 167 31.1
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 2.6e-06 57.4 276 30.4
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 3.5e-06 57.0 360 23.6


User provided reference genes

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