Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 6.9e-242 840.1 396 100.0
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.5e-207 725.3 394 87.1
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.2e-196 689.9 396 83.6
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.9e-195 685.3 397 82.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.7e-192 676.0 393 81.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.9e-192 674.9 398 81.2
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.1e-191 673.3 392 80.9
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.5e-191 672.9 385 83.9
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.5e-191 672.9 398 80.4
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 3.3e-191 671.8 398 80.7
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.5e-188 662.9 392 82.4
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.5e-188 662.9 391 79.3
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.6e-188 662.1 398 80.4
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 3.4e-188 661.8 378 83.3
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.8e-188 661.0 353 85.0
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.5e-188 660.6 410 76.8
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 9.9e-188 660.2 398 77.9
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.2e-187 659.1 392 79.1
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.4e-186 655.6 332 91.9
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.1e-186 654.8 391 78.8
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 3.5e-185 651.7 348 85.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 7.8e-185 650.6 350 87.4
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.0e-184 650.2 394 78.9
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 2.3e-184 649.0 355 84.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.9e-184 648.3 397 77.8
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.1e-183 646.7 397 77.8
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.9e-183 646.0 329 90.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.9e-183 646.0 363 80.7
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.9e-183 646.0 390 80.8
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.3e-183 645.2 359 82.2
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 5.6e-183 644.4 401 77.8
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.6e-182 642.9 396 77.3
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 2.1e-182 642.5 395 77.7
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 3.6e-182 641.7 401 76.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 6.2e-182 641.0 390 78.7
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.1e-181 640.2 329 89.4
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.8e-181 639.4 389 78.1
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.8e-181 639.4 401 77.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.8e-181 639.4 401 75.8
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.1e-181 638.6 366 81.7
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.2e-180 636.7 385 77.9
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 2.0e-180 636.0 384 77.3
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 5.8e-180 634.4 389 77.6
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.8e-180 634.4 383 78.1
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.3e-179 633.3 375 78.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 3.8e-179 631.7 387 77.8
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.9e-178 629.4 350 84.3
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.4e-178 629.0 366 80.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.6e-177 626.3 373 78.6
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.3e-176 622.5 364 79.9
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.7e-176 620.5 404 74.3
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.6e-174 616.3 364 80.8
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.6e-174 616.3 361 80.6
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.1e-174 615.9 387 75.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.8e-174 615.5 392 74.5
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.8e-174 615.5 387 75.2
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.1e-174 614.0 327 85.6
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 3.4e-172 608.6 318 86.2
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.4e-172 608.6 389 75.1
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.4e-172 608.2 326 84.0
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 4.4e-172 608.2 386 74.9
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 2.2e-171 605.9 404 72.3
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 6.4e-171 604.4 322 84.5
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.1e-170 603.6 641 53.0
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 2.4e-170 602.4 381 73.0
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.2e-170 602.1 367 78.2
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 3.2e-170 602.1 390 72.6
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 9.3e-170 600.5 335 81.2
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.1e-169 599.4 329 82.4
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.7e-169 599.0 315 85.7
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.0e-168 597.0 351 78.6
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.3e-168 595.9 410 70.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.9e-167 592.8 369 75.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.3e-167 592.0 369 75.1
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.8e-166 589.0 372 74.2
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 3.6e-166 588.6 324 81.2
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 6.2e-166 587.8 371 73.9
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.4e-165 586.6 377 74.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 2.4e-165 585.9 429 68.8
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.2e-164 583.6 374 76.2
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 7.6e-164 580.9 324 81.5
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 8.4e-163 577.4 398 69.6
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.9e-162 576.2 334 78.7
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 5.4e-162 574.7 315 82.5
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 3.0e-160 568.9 406 68.2
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 8.7e-160 567.4 329 76.6
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 5.3e-157 558.1 297 84.2
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.4e-154 549.3 390 66.9
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 7.9e-153 544.3 293 82.9
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.3e-152 543.5 327 77.1
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.3e-146 520.8 324 75.6
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.1e-144 515.0 328 69.8
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 5.7e-143 511.5 284 80.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.2e-142 509.6 328 68.0
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 2.2e-142 509.6 317 70.3
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.3e-139 500.4 315 70.8
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 2.0e-127 459.9 319 64.9
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.8e-120 436.8 248 79.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 2.2e-110 403.3 257 74.7
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.4e-109 399.8 270 71.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.8e-103 377.9 226 79.2
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.8e-103 377.9 278 66.5
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.8e-93 347.1 360 45.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 8.6e-83 311.6 310 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.1e-82 311.2 351 42.5
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.5e-82 310.8 311 47.3
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.1e-73 280.4 165 77.6
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 9.9e-63 245.0 191 62.8
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.4e-56 224.6 126 78.6
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 5.3e-56 222.6 186 57.0
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.4e-53 214.5 334 38.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.3e-50 203.4 204 53.9
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 2.1e-49 200.7 134 72.4
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.8e-48 197.6 196 46.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 1.1e-32 145.2 84 73.8
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.7e-22 111.3 57 86.0
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.8e-17 93.2 79 53.2
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 1.9e-13 81.3 62 64.5
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 7.2e-13 79.3 39 82.1
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.0e-07 61.2 34 67.6
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 1.7e-06 58.2 35 65.7
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 2.9e-06 57.4 147 24.5
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 3.8e-06 57.0 100 33.0
Ca_18522_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 8.5e-06 55.8 122 30.3
Ca_29900_v3 Cicer arietinum L. HOM05D000363 ORTHO05D000236 8.5e-06 55.8 122 30.3


User provided reference genes

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