Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G141400 Carya illinoinensis HOM05D002914 ORTHO05D003196 1.2e-49 199.9 133 100.0
Cfa005429 Carpinus fangiana HOM05D002914 ORTHO05D003196 4.5e-28 128.3 119 72.3
CiPaw.05G054900 Carya illinoinensis HOM05D002914 ORTHO05D003196 2.7e-25 119.0 118 75.4
Thecc.02G096100 Theobroma cacao HOM05D002914 ORTHO05D003196 6.3e-22 107.8 119 69.7
FAN20G0574 Fragaria x ananassa HOM05D002914 ORTHO05D003196 4.5e-20 101.7 123 66.7
TAR628G0868 Trochodendron aralioides HOM05D002914 ORTHO05D003196 5.9e-20 101.3 121 56.2
FvH4_2g06840 Fragaria vesca HOM05D002914 ORTHO05D003196 2.3e-19 99.4 122 63.9
FAN15G1103 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.3e-19 99.4 123 65.9
FAN24G0092 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.9e-19 99.0 123 63.4
COL.COLO4_11718 Corchorus olitorius HOM05D002914 ORTHO05D003196 1.5e-18 96.7 109 70.6
Duzib052G1256 Durio zibethinus HOM05D002914 ORTHO05D003196 4.2e-18 95.1 119 47.9
Lalb_Chr16g0384551 Lupinus albus HOM05D002914 ORTHO05D003196 1.2e-17 93.6 125 46.4
Atru.chr5.2809 Acer truncatum HOM05D002914 ORTHO05D003196 4.7e-17 91.7 122 46.7
Phvul.003G294100 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 6.1e-17 91.3 119 60.5
Gohir.D13G036200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 8.0e-17 90.9 119 66.4
Manes.15G143200 Manihot esculenta HOM05D002914 ORTHO05D003196 8.0e-17 90.9 123 66.7
Gohir.A13G037800 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.4e-16 90.1 119 66.4
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 1.4e-16 90.1 118 45.8
RcHm_v2.0_Chr6g0259071 Rosa chinensis HOM05D002914 ORTHO05D003196 1.8e-16 89.7 119 45.4
Nn5g30169 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.3e-16 89.4 115 55.7
Dinv42126 Davidia involucrata HOM05D002914 ORTHO05D003196 4.0e-16 88.6 95 53.7
Prupe.8G116500 Prunus persica HOM05D002914 ORTHO05D003196 6.8e-16 87.8 82 75.6
Glyma.07G210000 Glycine max HOM05D002914 ORTHO05D003196 1.2e-15 87.0 90 60.0
Nn1g05872 Nelumbo nucifera HOM05D002914 ORTHO05D003196 2.0e-15 86.3 112 58.0
Potri.004G144400 Populus trichocarpa HOM05D002914 ORTHO05D003196 2.0e-15 86.3 128 50.0
Gorai.013G040900 Gossypium raimondii HOM05D002914 ORTHO05D003196 2.6e-15 85.9 93 75.3
VMungo0251G3532 Vigna mungo HOM05D002914 ORTHO05D003196 3.4e-15 85.5 119 52.1
SalBow6G6648 Salvia bowleyana HOM05D002914 ORTHO05D003196 4.4e-15 85.1 92 67.4
Aqoxy5G01394 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 9.8e-15 84.0 111 39.6
CsaV3_7G008810 Cucumis sativus L. HOM05D002914 ORTHO05D003196 1.3e-14 83.6 118 42.4
Glyma.02G134900 Glycine max HOM05D002914 ORTHO05D003196 2.2e-14 82.8 87 69.0
Sabra04G0095900 Salix brachista HOM05D002914 ORTHO05D003196 4.9e-14 81.6 120 55.8
MELO3C010895.2 Cucumis melo HOM05D002914 ORTHO05D003196 8.3e-14 80.9 103 50.5
Medtr4g086780 Medicago truncatula HOM05D002914 ORTHO05D003196 8.3e-14 80.9 87 49.4
Atru.chr13.614 Acer truncatum HOM05D002914 ORTHO05D003196 1.4e-13 80.1 121 42.1
ClCG02G005720 Citrullus lanatus HOM05D002914 ORTHO05D003196 1.4e-13 80.1 118 41.5
Rhsim05G0080600 Rhododendron simsii HOM05D002914 ORTHO05D003196 1.4e-13 80.1 94 47.9
Aqoxy6G00878 Aquilegia oxysepala HOM05D002914 ORTHO05D003196 1.8e-13 79.7 109 41.3
Lalb_Chr05g0219001 Lupinus albus HOM05D002914 ORTHO05D003196 1.8e-13 79.7 122 56.6
QL11p038331 Quercus lobata HOM05D002914 ORTHO05D003196 1.8e-13 79.7 103 68.9
TWI36G0119 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 1.8e-13 79.7 118 44.9
Eucgr.I01175 Eucalyptus grandis HOM05D002914 ORTHO05D003196 2.4e-13 79.3 104 52.9
Thecc.08G014700 Theobroma cacao HOM05D002914 ORTHO05D003196 2.4e-13 79.3 91 46.2
arahy.Tifrunner.gnm1.ann1.2E3RSG Arachis hypogaea HOM05D002914 ORTHO05D003196 3.2e-13 79.0 138 47.1
Psat7g121600 Pisum sativum HOM05D002914 ORTHO05D003196 4.1e-13 78.6 120 56.7
Sed0007891 Sechium edule HOM05D002914 ORTHO05D003196 4.1e-13 78.6 120 52.5
TWI31G1086 Tripterygium wilfordii HOM05D002914 ORTHO05D003196 4.1e-13 78.6 120 41.7
Duzib248G0090 Durio zibethinus HOM05D002914 ORTHO05D003196 5.4e-13 78.2 87 49.4
Sopen01g050550 Solanum pennellii HOM05D002914 ORTHO05D003196 5.4e-13 78.2 137 40.9
CsaV3_2G028190 Cucumis sativus L. HOM05D002914 ORTHO05D003196 9.2e-13 77.4 120 45.8
Sabra09G0081200 Salix brachista HOM05D002914 ORTHO05D003196 9.2e-13 77.4 125 52.0
QL02p006168 Quercus lobata HOM05D002914 ORTHO05D003196 1.2e-12 77.0 120 39.2
Gorai.005G240100 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.6e-12 76.6 121 47.9
COL.COLO4_26446 Corchorus olitorius HOM05D002914 ORTHO05D003196 2.0e-12 76.3 116 59.5
Gohir.A03G191200 Gossypium hirsutum HOM05D002914 ORTHO05D003196 2.7e-12 75.9 121 43.0
CSS0030933 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 4.5e-12 75.1 94 66.0
CSS0032479 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 4.5e-12 75.1 94 66.0
DCAR_022064 Daucus carota HOM05D002914 ORTHO05D003196 4.5e-12 75.1 111 44.1
ECA236G0292 Erigeron canadensis HOM05D002914 ORTHO05D003196 4.5e-12 75.1 110 43.6
Solyc01g108330.2 Solanum lycopersicum HOM05D002914 ORTHO05D003196 4.5e-12 75.1 137 40.1
Cpa.g.sc62.45 Carica papaya HOM05D002914 ORTHO05D003196 5.9e-12 74.7 126 57.9
Oeu013680.1 Olea europaea HOM05D002914 ORTHO05D003196 5.9e-12 74.7 116 41.4
PGR142G0527 Punica granatum HOM05D002914 ORTHO05D003196 5.9e-12 74.7 78 65.4
MELO3C028578.2 Cucumis melo HOM05D002914 ORTHO05D003196 7.8e-12 74.3 87 47.1
Potri.014G035400 Populus trichocarpa HOM05D002914 ORTHO05D003196 7.8e-12 74.3 91 45.1
ClCG08G015580 Citrullus lanatus HOM05D002914 ORTHO05D003196 1.0e-11 73.9 121 44.6
Potri.009G106300 Populus trichocarpa HOM05D002914 ORTHO05D003196 1.3e-11 73.6 102 51.0
SGA_v2.0_scaffold58G20610 Striga asiatica HOM05D002914 ORTHO05D003196 1.3e-11 73.6 87 43.7
Ca_18662_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 2.3e-11 72.8 109 52.3
Ciclev10002811m.g Citrus clementina HOM05D002914 ORTHO05D003196 2.3e-11 72.8 91 57.1
Lalb_Chr09g0328151 Lupinus albus HOM05D002914 ORTHO05D003196 2.3e-11 72.8 89 53.9
PGSC0003DMG400025804 Solanum tuberosum HOM05D002914 ORTHO05D003196 2.3e-11 72.8 137 38.7
Lj5P206T48 Lonicera japonica HOM05D002914 ORTHO05D003196 3.9e-11 72.0 95 45.3
Nitab4.5_0002462g0040 Nicotiana tabacum HOM05D002914 ORTHO05D003196 3.9e-11 72.0 61 63.9
Hma1.2p1_1589F.1_g292395 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 8.6e-11 70.9 93 45.2
Hma1.2p1_2598F.1_g325150 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 8.6e-11 70.9 93 45.2
PSO170G6047 Papaver somniferum HOM05D002914 ORTHO05D003196 8.6e-11 70.9 82 43.9
Oeu003691.1 Olea europaea HOM05D002914 ORTHO05D003196 1.1e-10 70.5 79 51.9
arahy.Tifrunner.gnm1.ann1.ZME7HS Arachis hypogaea HOM05D002914 ORTHO05D003196 1.9e-10 69.7 135 45.2
Migut.B00310 Erythranthe guttata HOM05D002914 ORTHO05D003196 1.9e-10 69.7 84 45.2
Sed0010504 Sechium edule HOM05D002914 ORTHO05D003196 1.9e-10 69.7 114 38.6
Sed0019897 Sechium edule HOM05D002914 ORTHO05D003196 1.9e-10 69.7 120 38.3
Gohir.D02G212150 Gossypium hirsutum HOM05D002914 ORTHO05D003196 3.3e-10 68.9 122 45.1
Glyma.06G036600 Glycine max HOM05D002914 ORTHO05D003196 4.3e-10 68.6 70 54.3
HanXRQChr16g0509571 Helianthus annuus HOM05D002914 ORTHO05D003196 4.3e-10 68.6 85 47.1
Peaxi162Scf00016g00161 Petunia axillaris HOM05D002914 ORTHO05D003196 4.3e-10 68.6 71 54.9
PGR083G2546 Punica granatum HOM05D002914 ORTHO05D003196 5.6e-10 68.2 46 65.2
CDE02G0277 Ceratophyllum demersum HOM05D002914 ORTHO05D003196 7.3e-10 67.8 120 37.5
Prupe.1G441900 Prunus persica HOM05D002914 ORTHO05D003196 7.3e-10 67.8 120 55.0
TAR376G1047 Trochodendron aralioides HOM05D002914 ORTHO05D003196 7.3e-10 67.8 124 41.9
Nitab4.5_0000876g0190 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.2e-09 67.0 86 40.7
AL4G19370 Arabidopsis lyrata HOM05D002914 ORTHO05D003196 1.6e-09 66.6 93 38.7
Carub.0004s0669 Capsella rubella HOM05D002914 ORTHO05D003196 1.6e-09 66.6 94 38.3
Ca_15973_v3 Cicer arietinum L. HOM05D002914 ORTHO05D003196 1.6e-09 66.6 110 39.1
Lalb_Chr23g0266911 Lupinus albus HOM05D002914 ORTHO05D003196 1.6e-09 66.6 113 38.1
Oeu007255.1 Olea europaea HOM05D002914 ORTHO05D003196 1.6e-09 66.6 78 50.0
Medtr3g101240 Medicago truncatula HOM05D002914 ORTHO05D003196 2.1e-09 66.2 75 50.7
TAR625G1140 Trochodendron aralioides HOM05D002914 ORTHO05D003196 2.1e-09 66.2 78 46.2
arahy.Tifrunner.gnm1.ann1.HH3ECB Arachis hypogaea HOM05D002914 ORTHO05D003196 2.8e-09 65.9 116 39.7
Nitab4.5_0000876g0210 Nicotiana tabacum HOM05D002914 ORTHO05D003196 2.8e-09 65.9 119 36.1
Sc08g0000120 Simmondsia chinensis HOM05D002914 ORTHO05D003196 2.8e-09 65.9 94 57.4
AT2G26520 Arabidopsis thaliana HOM05D002914 ORTHO05D003196 3.6e-09 65.5 95 35.8
FvH4_2g35030 Fragaria vesca HOM05D002914 ORTHO05D003196 3.6e-09 65.5 59 55.9
CANSAT25G0897 Cannabis sativa HOM05D002914 ORTHO05D003196 4.7e-09 65.1 40 70.0
Oeu003693.1 Olea europaea HOM05D002914 ORTHO05D003196 4.7e-09 65.1 42 69.0
Oeu010582.1 Olea europaea HOM05D002914 ORTHO05D003196 4.7e-09 65.1 42 69.0
FAN15G3578 Fragaria x ananassa HOM05D002914 ORTHO05D003196 6.1e-09 64.7 59 54.2
Glyma.04G036500 Glycine max HOM05D002914 ORTHO05D003196 6.1e-09 64.7 109 39.4
RcHm_v2.0_Chr6g0306971 Rosa chinensis HOM05D002914 ORTHO05D003196 8.0e-09 64.3 49 61.2
Nitab4.5_0002673g0030 Nicotiana tabacum HOM05D002914 ORTHO05D003196 1.0e-08 63.9 120 35.0
Gohir.A06G015600 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.4e-08 63.5 42 66.7
Gohir.D06G013700 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.4e-08 63.5 42 66.7
Gorai.010G016300 Gossypium raimondii HOM05D002914 ORTHO05D003196 1.4e-08 63.5 42 66.7
EL10Ac9g21822 Beta vulgaris HOM05D002914 ORTHO05D003196 1.8e-08 63.2 48 54.2
CSS0043526 Camellia sinensis var. sinensis HOM05D002914 ORTHO05D003196 1.8e-08 63.2 42 66.7
Sp4g07710 Schrenkiella parvula HOM05D002914 ORTHO05D003196 1.8e-08 63.2 53 56.6
THA.LOC104803788 Tarenaya hassleriana HOM05D002914 ORTHO05D003196 1.8e-08 63.2 116 34.5
CDE01G0545 Ceratophyllum demersum HOM05D000767 ORTHO05D003196 2.3e-08 62.8 122 36.1
FAN20G2785 Fragaria x ananassa HOM05D002914 ORTHO05D003196 2.3e-08 62.8 59 52.5
Psat5g044840 Pisum sativum HOM05D002914 ORTHO05D003196 2.3e-08 62.8 75 48.0
TPR.G40737 Trifolium pratense HOM05D002914 ORTHO05D003196 2.3e-08 62.8 116 38.8
Lj1g0002449 Lotus japonicus HOM05D002914 ORTHO05D003196 3.1e-08 62.4 63 54.0
Aa31LG5G9350 Aethionema arabicum HOM05D002914 ORTHO05D003196 4.0e-08 62.0 70 45.7
ATR0225G004 Amborella trichopoda HOM05D002914 ORTHO05D003196 4.0e-08 62.0 124 33.9
Ah.01g020080 Amaranthus hybridus HOM05D002914 ORTHO05D003196 5.2e-08 61.6 41 61.0
FAN27G2590 Fragaria x ananassa HOM05D002914 ORTHO05D003196 6.8e-08 61.2 59 52.5
Manes.05G170100 Manihot esculenta HOM05D002914 ORTHO05D003196 1.2e-07 60.5 85 54.1
HanXRQChr04g0128331 Helianthus annuus HOM05D002914 ORTHO05D003196 3.4e-07 58.9 114 36.0
Sc15g0006440 Simmondsia chinensis HOM05D002914 ORTHO05D003196 4.4e-07 58.5 40 62.5
Cpa.g.sc376.2 Carica papaya HOM05D002914 ORTHO05D003196 7.5e-07 57.8 80 40.0
Gorai.005G104900 Gossypium raimondii HOM05D002914 ORTHO05D003196 7.5e-07 57.8 90 36.7
PSO675G1122 Papaver somniferum HOM05D000003 ORTHO05D001026 9.8e-07 57.4 41 56.1
Phvul.001G135000 Phaseolus vulgaris HOM05D002914 ORTHO05D003196 9.8e-07 57.4 48 62.5
Gohir.D02G092940 Gossypium hirsutum HOM05D002914 ORTHO05D003196 1.3e-06 57.0 83 33.7
SEGI_00607 Sequoiadendron giganteum HOM05D002914 ORTHO05D003196 6.4e-06 54.7 41 53.7
Prupe.7G063700 Prunus persica HOM05D002914 ORTHO05D003196 8.3e-06 54.3 53 50.9
VMungo1383G1568 Vigna mungo HOM05D002914 ORTHO05D003196 8.3e-06 54.3 43 62.8


User provided reference genes

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