Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 3.8e-73 278.1 144 100.0
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 7.7e-66 253.8 144 90.3
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 2.3e-62 242.3 146 87.0
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 2.3e-62 242.3 146 87.0
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 2.0e-61 239.2 146 84.9
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 9.8e-61 236.9 147 84.4
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 2.8e-60 235.3 147 85.0
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 4.9e-60 234.6 147 83.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 4.9e-60 234.6 145 84.1
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 4.9e-60 234.6 147 84.4
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 8.3e-60 233.8 146 84.9
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.4e-59 233.0 147 83.7
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.4e-59 233.0 146 84.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 1.8e-59 232.6 146 82.9
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 3.1e-59 231.9 145 83.4
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 3.1e-59 231.9 146 82.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 7.0e-59 230.7 146 82.9
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 7.0e-59 230.7 147 81.0
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 9.2e-59 230.3 146 84.2
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 1.2e-58 229.9 146 82.2
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 2.0e-58 229.2 147 82.3
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 81.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 81.9
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 83.0
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 2.7e-58 228.8 144 81.9
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.5e-58 228.4 146 80.1
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.5e-58 228.4 146 80.1
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 4.5e-58 228.0 147 81.6
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 4.5e-58 228.0 145 83.4
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 5.9e-58 227.6 146 80.8
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 5.9e-58 227.6 144 81.2
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 7.8e-58 227.3 146 80.8
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.0e-57 226.9 144 81.2
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.3e-57 225.7 146 80.8
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.0e-57 224.6 147 81.6
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 5.0e-57 224.6 147 81.6
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 5.0e-57 224.6 147 80.3
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.6e-57 224.2 147 81.6
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 6.6e-57 224.2 146 83.6
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 8.6e-57 223.8 146 80.1
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.5e-56 223.0 144 79.9
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.9e-56 222.6 147 79.6
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 3.3e-56 221.9 147 78.9
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 4.3e-56 221.5 146 79.5
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 7.3e-56 220.7 147 78.2
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 9.5e-56 220.3 147 79.6
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 9.5e-56 220.3 147 79.6
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 9.5e-56 220.3 147 78.2
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.2e-55 219.9 145 80.7
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.6e-55 219.5 147 78.9
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 2.1e-55 219.2 146 80.8
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 76.9
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 2.8e-55 218.8 146 78.1
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 4.7e-55 218.0 145 79.3
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 6.1e-55 217.6 149 76.5
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.0e-54 216.9 147 78.9
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.8e-54 216.1 144 77.1
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 2.3e-54 215.7 147 74.1
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 3.0e-54 215.3 146 78.8
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 3.0e-54 215.3 146 76.0
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.0e-54 215.3 146 78.1
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 5.2e-54 214.5 145 76.6
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 6.8e-54 214.2 146 76.0
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 8.9e-54 213.8 139 80.6
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 8.9e-54 213.8 146 76.7
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 2.6e-53 212.2 144 77.8
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 3.4e-53 211.8 155 75.5
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 4.4e-53 211.5 146 77.4
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.8e-53 210.3 148 75.7
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.7e-52 209.5 144 77.8
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 8.3e-52 207.2 146 74.7
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.4e-51 205.7 147 77.6
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 3.2e-51 205.3 146 75.3
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.1e-51 204.9 146 75.3
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 4.1e-51 204.9 147 74.1
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.6e-50 203.0 146 74.0
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 2.7e-50 202.2 147 74.1
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 3.5e-50 201.8 149 71.8
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 4.6e-50 201.4 147 72.8
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 6.0e-50 201.1 137 78.1
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 7.8e-50 200.7 148 72.3
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.6e-49 197.6 150 70.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.6e-49 197.6 150 70.0
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.9e-48 196.1 150 73.3
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 4.3e-48 194.9 144 72.9
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.3e-48 194.1 152 71.1
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-47 193.4 144 72.2
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.1e-47 192.6 144 72.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.5e-45 186.4 152 67.1
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 7.5e-45 184.1 152 67.8
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 9.8e-45 183.7 156 65.4
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 1.3e-44 183.3 115 81.7
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 2.9e-44 182.2 150 65.3
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 2.9e-44 182.2 151 65.6
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 2.4e-43 179.1 154 64.9
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.2e-42 176.8 153 65.4
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 1.6e-42 176.4 153 64.1
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 2.1e-42 176.0 147 65.3
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 2.1e-42 176.0 153 63.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 6.0e-42 174.5 147 64.6
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 7.3e-40 167.5 161 57.8
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 2.1e-39 166.0 149 59.7
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.8e-39 165.6 109 79.8
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 3.6e-39 165.2 147 63.9
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 6.2e-39 164.5 136 66.2
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 6.2e-39 164.5 136 66.2
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.4e-38 163.3 149 61.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 5.2e-38 161.4 112 78.6
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 4.4e-37 158.3 105 78.1
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 2.9e-36 155.6 100 79.0
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 1.9e-35 152.9 150 59.3
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.4e-35 151.4 139 64.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.7e-33 146.4 146 58.9
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 8.6e-33 144.1 133 60.9
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.3e-32 141.7 130 60.0
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 2.4e-30 136.0 150 54.0
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 6.8e-30 134.4 85 80.0
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 2.6e-29 132.5 94 72.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.1e-27 125.2 88 70.5
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 4.1e-27 125.2 88 70.5
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 9.2e-27 124.0 149 47.7
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 4.6e-26 121.7 131 49.6
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 4.4e-21 105.1 166 43.4
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 4.9e-20 101.7 78 67.9
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 9.3e-19 97.4 142 47.9
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 1.0e-17 94.0 79 59.5
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 1.3e-17 93.6 79 57.0
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 5.1e-17 91.7 71 70.4
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 6.6e-17 91.3 92 54.3
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 2.5e-16 89.4 145 37.9
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.5e-16 89.4 71 63.4
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.5e-16 89.4 71 63.4
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 2.5e-16 89.4 71 64.8
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 7.3e-16 87.8 69 59.4
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.6e-15 86.7 69 63.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.1e-15 86.3 69 63.8
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.8e-15 85.9 69 62.3
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 4.9e-12 75.1 72 54.2
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.1e-11 73.9 72 54.2
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 1.1e-08 63.9 72 48.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.9e-08 63.2 70 45.7
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.9e-08 63.2 125 40.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 6.9e-06 54.7 60 53.3


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