Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 1.7e-78 296.2 183 100.0
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.6e-23 113.6 108 60.2
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 2.1e-23 113.2 107 58.9
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 4.6e-23 112.1 108 59.3
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 2.4e-19 99.8 126 53.2
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 8.4e-17 91.3 93 52.7
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 9.3e-16 87.8 109 46.8
CiPaw.06G136400 Carya illinoinensis HOM05D007556 ORTHO05D002252 4.6e-15 85.5 109 49.5
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 4.6e-15 85.5 104 46.2
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 1.0e-14 84.3 94 51.1
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.3e-14 84.0 95 48.4
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 3.0e-14 82.8 92 50.0
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.1e-14 82.0 94 47.9
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 6.7e-14 81.6 96 43.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 8.7e-14 81.3 94 46.8
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.1e-13 80.9 107 42.1
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.1e-13 80.9 104 47.1
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.5e-13 80.5 94 45.7
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 2.5e-13 79.7 74 52.7
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.4e-13 78.2 96 42.7
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 9.7e-13 77.8 94 46.8
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.2e-12 76.6 97 42.3
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 6.3e-12 75.1 92 44.6
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.3e-12 75.1 95 43.2
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 8.2e-12 74.7 101 46.5
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.1e-11 74.3 95 43.2
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 1.4e-11 73.9 108 42.6
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 2.4e-11 73.2 115 40.9
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.4e-11 73.2 96 41.7
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 2.4e-11 73.2 84 51.2
COL.COLO4_11794 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.1e-11 72.8 103 42.7
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.1e-11 72.8 92 45.7
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 3.1e-11 72.8 86 45.3
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 6.9e-11 71.6 107 43.0
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 2.0e-10 70.1 98 43.9
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 2.6e-10 69.7 100 44.0
COL.COLO4_03329 Corchorus olitorius HOM05D007556 ORTHO05D002252 4.5e-10 68.9 121 39.7
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 5.9e-10 68.6 98 40.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 5.9e-10 68.6 92 43.5
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 5.9e-10 68.6 99 38.4
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 1.0e-09 67.8 99 41.4
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 1.3e-09 67.4 93 43.0
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 2.2e-09 66.6 104 45.2
COL.COLO4_25910 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.2e-09 66.6 107 41.1
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 2.2e-09 66.6 107 41.1
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.8e-09 65.9 112 38.4
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 3.8e-09 65.9 92 40.2
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 6.5e-09 65.1 111 39.6
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 1.1e-08 64.3 92 40.2
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 1.9e-08 63.5 108 42.6
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 1.9e-08 63.5 105 38.1
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.9e-08 63.5 90 43.3
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.9e-08 63.5 67 55.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 2.5e-08 63.2 95 40.0
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.2e-08 62.8 96 40.6
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 4.2e-08 62.4 97 41.2
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 9.4e-08 61.2 103 38.8
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 1.6e-07 60.5 53 58.5
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.6e-07 60.5 67 53.7
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 2.1e-07 60.1 97 39.2
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-07 60.1 67 52.2
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 2.1e-07 60.1 67 52.2
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 2.7e-07 59.7 63 50.8
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 2.7e-07 59.7 67 52.2
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 2.7e-07 59.7 49 57.1
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 4.6e-07 58.9 93 40.9
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 7.9e-07 58.2 89 40.4
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 7.9e-07 58.2 82 42.7
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 1.0e-06 57.8 113 33.6
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 1.0e-06 57.8 77 41.6
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.4e-06 57.4 101 36.6
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.4e-06 57.4 101 36.6
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 1.4e-06 57.4 100 37.0
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.8e-06 57.0 98 39.8
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.8e-06 57.0 90 40.0
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 1.8e-06 57.0 89 39.3
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.0e-06 56.2 106 37.7
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 3.0e-06 56.2 45 62.2
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 3.9e-06 55.8 93 35.5
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 5.1e-06 55.5 42 61.9
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 5.1e-06 55.5 95 38.9
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 5.1e-06 55.5 68 39.7
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 6.7e-06 55.1 94 37.2
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.8e-06 54.7 104 37.5
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 8.8e-06 54.7 97 34.0


User provided reference genes

Program Settings