Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G120000 Carya illinoinensis HOM05D008303 ORTHO05D010386 1.4e-75 286.2 148 100.0
QL11p052465 Quercus lobata HOM05D008303 ORTHO05D010386 9.2e-22 107.5 138 57.2
Cfa005292 Carpinus fangiana HOM05D008303 ORTHO05D010386 1.1e-17 94.0 143 46.9
Haze_02095 Corylus avellana HOM05D008303 ORTHO05D010386 1.1e-17 94.0 143 49.0
Potri.009G138700 Populus trichocarpa HOM05D008303 ORTHO05D010386 1.1e-14 84.0 141 44.0
Potri.004G178500 Populus trichocarpa HOM05D008303 ORTHO05D010386 4.1e-14 82.0 144 43.1
Manes.04G070500 Manihot esculenta HOM05D008303 ORTHO05D010386 1.6e-13 80.1 141 45.4
Sabra04G0120100 Salix brachista HOM05D008303 ORTHO05D010386 1.6e-13 80.1 144 43.1
Manes.04G070400 Manihot esculenta HOM05D008303 ORTHO05D010386 7.8e-13 77.8 141 44.7
Dinv14130 Davidia involucrata HOM05D001535 ORTHO05D003710 1.7e-12 76.6 101 54.5
Ciclev10030089m.g Citrus clementina HOM05D008303 ORTHO05D010386 1.9e-11 73.2 143 38.5
COL.COLO4_36726 Corchorus olitorius HOM05D008303 ORTHO05D010386 2.5e-11 72.8 131 47.3
Thecc.02G054500 Theobroma cacao HOM05D008303 ORTHO05D010386 2.5e-11 72.8 125 44.0
COL.COLO4_36725 Corchorus olitorius HOM05D008303 ORTHO05D010386 5.6e-11 71.6 131 45.0
Gohir.D01G161900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 7.3e-11 71.2 126 42.1
QL11p052446 Quercus lobata HOM05D008303 ORTHO05D010386 2.1e-10 69.7 108 46.3
Gorai.005G255400 Gossypium raimondii HOM05D008303 ORTHO05D010386 2.8e-10 69.3 135 43.0
Glyma.10G283700 Glycine max HOM05D008303 ORTHO05D010386 4.7e-10 68.6 123 47.2
Gohir.A03G206100 Gossypium hirsutum HOM05D008303 ORTHO05D010386 4.7e-10 68.6 135 43.0
Gorai.002G200800 Gossypium raimondii HOM05D008303 ORTHO05D010386 1.1e-09 67.4 127 41.7
Prupe.8G169600 Prunus persica HOM05D008303 ORTHO05D010386 1.4e-09 67.0 88 51.1
Aqoxy5G01096 Aquilegia oxysepala HOM05D008303 ORTHO05D010386 5.2e-09 65.1 141 36.2
Sabra09G0107400 Salix brachista HOM05D008303 ORTHO05D010386 1.2e-08 63.9 145 40.7
Gohir.D02G227500 Gossypium hirsutum HOM05D008303 ORTHO05D010386 1.5e-08 63.5 135 42.2
Gohir.A01G170900 Gossypium hirsutum HOM05D008303 ORTHO05D010386 2.0e-08 63.2 125 37.6
Sc18g0006250 Simmondsia chinensis HOM05D008303 ORTHO05D010386 2.0e-08 63.2 140 35.0
Migut.B00055 Erythranthe guttata HOM05D008303 ORTHO05D010386 3.4e-08 62.4 122 40.2
Rhsim11G0193900 Rhododendron simsii HOM05D008303 ORTHO05D010386 3.4e-08 62.4 126 36.5
Sed0009685 Sechium edule HOM05D008303 ORTHO05D010386 4.4e-08 62.0 138 38.4
Cpa.g.sc20.118 Carica papaya HOM05D008303 ORTHO05D010386 5.8e-08 61.6 98 41.8
Nn6g31905 Nelumbo nucifera HOM05D008303 ORTHO05D010386 1.3e-07 60.5 132 37.9
Ciclev10030098m.g Citrus clementina HOM05D008303 ORTHO05D010386 1.7e-07 60.1 92 45.7
ClCG02G003900 Citrullus lanatus HOM05D008303 ORTHO05D010386 8.4e-07 57.8 136 38.2
Atru.chr5.3448 Acer truncatum HOM05D008303 ORTHO05D010386 1.1e-06 57.4 143 38.5
arahy.Tifrunner.gnm1.ann1.DC2STY Arachis hypogaea HOM05D008303 ORTHO05D010386 1.1e-06 57.4 133 34.6
Lalb_Chr02g0143531 Lupinus albus HOM05D008303 ORTHO05D010386 2.4e-06 56.2 113 37.2
Nitab4.5_0004867g0100 Nicotiana tabacum HOM05D008303 ORTHO05D010386 2.4e-06 56.2 112 36.6
MELO3C013332.2 Cucumis melo HOM05D008303 ORTHO05D010386 7.1e-06 54.7 140 35.7


User provided reference genes

Program Settings