Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 5.2e-43 177.2 82 100.0
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 6.4e-33 143.7 82 81.7
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 9.6e-29 129.8 82 74.4
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 3.4e-26 121.3 83 68.7
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 9.9e-26 119.8 85 65.9
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 6.4e-25 117.1 83 67.5
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 1.9e-24 115.5 85 67.1
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 1.9e-24 115.5 85 67.1
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 3.2e-24 114.8 83 65.1
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 7.1e-24 113.6 82 68.3
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 7.1e-24 113.6 83 61.4
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 3.0e-22 108.2 83 66.3
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 5.1e-22 107.5 84 61.9
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.9e-21 105.5 83 62.7
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 4.3e-21 104.4 83 65.1
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 4.3e-21 104.4 83 63.9
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 9.6e-21 103.2 83 60.2
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 3.7e-20 101.3 83 62.7
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 8.1e-20 100.1 83 60.2
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 4.0e-19 97.8 83 59.0
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 4.0e-19 97.8 79 59.5
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 9.0e-19 96.7 84 61.9
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 9.0e-19 96.7 83 57.8
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 9.0e-19 96.7 85 56.5
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 1.3e-17 92.8 84 56.0
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 3.8e-17 91.3 85 56.5
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 2.5e-16 88.6 89 59.6
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 1.0e-14 83.2 81 50.6
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 1.5e-13 79.3 69 59.4
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 3.3e-13 78.2 80 51.2
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 4.3e-13 77.8 83 53.0
TPR.G17065 Trifolium pratense HOM05D009245 ORTHO05D011414 6.9e-11 70.5 69 53.6
Lj3A1066T76 Lonicera japonica HOM05D000667 ORTHO05D003843 2.6e-10 68.6 81 44.4
EL10Ac6g13482 Beta vulgaris HOM05D009245 ORTHO05D011414 2.5e-08 62.0 85 43.5
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 3.2e-08 61.6 54 55.6


User provided reference genes

Program Settings