Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 1.8e-202 709.1 376 100.0
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 1.0e-64 251.5 238 57.6
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.3e-48 198.0 281 43.4
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 3.6e-46 189.9 229 47.6
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 8.8e-45 185.3 227 47.1
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-43 181.4 233 45.9
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-43 181.4 233 45.9
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 2.2e-43 180.6 229 45.4
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 2.4e-42 177.2 204 52.9
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 5.4e-42 176.0 342 35.7
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 4.5e-41 172.9 221 47.1
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 4.5e-41 172.9 321 38.9
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 1.0e-40 171.8 230 43.9
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.7e-40 171.0 279 41.2
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.8e-40 169.9 279 40.1
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 8.5e-40 168.7 221 43.4
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 1.2e-38 164.9 256 45.3
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 6.1e-38 162.5 241 40.7
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 6.8e-37 159.1 227 40.5
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 8.8e-37 158.7 377 31.8
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 4.9e-35 152.9 238 41.6
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 6.3e-35 152.5 227 38.3
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 1.4e-34 151.4 217 40.1
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 3.1e-34 150.2 378 30.7
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 4.1e-34 149.8 222 37.8
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 1.2e-33 148.3 229 40.6
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.2e-33 148.3 258 36.0
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.6e-33 147.9 230 40.0
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 1.6e-33 147.9 174 44.8
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 4.5e-33 146.4 270 36.7
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.3e-32 144.8 225 39.6
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 3.8e-32 143.3 157 43.3
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 6.6e-32 142.5 375 29.6
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 6.6e-32 142.5 223 38.1
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 3.3e-31 140.2 248 34.7
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 4.3e-31 139.8 231 39.8
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 5.6e-31 139.4 224 38.4
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 5.6e-31 139.4 225 38.7
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 7.3e-31 139.0 312 35.9
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 9.5e-31 138.7 233 42.5
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 9.5e-31 138.7 212 41.0
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 1.8e-29 134.4 252 36.1
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 3.0e-29 133.7 228 41.2
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 3.0e-29 133.7 234 38.9
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 5.2e-29 132.9 140 47.1
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 5.7e-28 129.4 258 34.9
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 5.7e-28 129.4 233 38.6
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 2.2e-27 127.5 228 34.6
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 2.2e-27 127.5 148 45.9
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.2e-27 127.5 119 50.4
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 8.3e-27 125.6 274 32.8
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 8.3e-27 125.6 235 34.9
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 2.4e-26 124.0 210 36.7
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 5.4e-26 122.9 261 36.0
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 5.4e-26 122.9 159 42.8
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 9.2e-26 122.1 379 29.0
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 1.6e-25 121.3 210 36.2
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-25 120.9 261 35.6
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-25 120.9 261 35.6
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 4.6e-25 119.8 379 29.8
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 4.6e-25 119.8 210 36.7
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 7.8e-25 119.0 171 40.4
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 3.0e-24 117.1 198 35.9
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 3.9e-24 116.7 157 43.9
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 1.9e-23 114.4 258 31.8
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 3.3e-23 113.6 158 41.8
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 2.3e-21 107.5 142 40.8
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 1.5e-20 104.8 192 34.9
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 1.3e-19 101.7 102 50.0
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 1.4e-18 98.2 120 42.5
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 2.0e-17 94.4 214 31.3
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 4.6e-17 93.2 125 43.2
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 7.8e-17 92.4 219 32.4
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 1.3e-16 91.7 215 30.7
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.0e-16 90.5 110 45.5
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 6.6e-16 89.4 212 30.7
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 8.6e-16 89.0 214 31.8
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 1.1e-15 88.6 212 29.7
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 1.9e-15 87.8 212 29.2
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 2.5e-15 87.4 210 31.0
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 3.3e-15 87.0 215 27.4
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 4.3e-15 86.7 157 34.4
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 5.6e-15 86.3 166 31.9
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 9.5e-15 85.5 166 31.9
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 1.2e-14 85.1 157 33.1
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 1.2e-14 85.1 157 33.1
Sopen04g010360 Solanum pennellii HOM05D007857 ORTHO05D009355 1.2e-14 85.1 98 45.9
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 2.1e-14 84.3 182 32.4
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 2.8e-14 84.0 157 33.8
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 4.7e-14 83.2 217 30.0
Nitab4.5_0004967g0040 Nicotiana tabacum HOM05D007857 ORTHO05D009355 4.7e-14 83.2 103 39.8
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 1.8e-13 81.3 319 28.5
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 3.1e-13 80.5 166 30.1
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 3.1e-13 80.5 166 30.1
Carub.0002s1388 Capsella rubella HOM05D010720 ORTHO05D009355 5.8e-12 76.3 199 28.1
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 7.8e-09 65.9 75 41.3
Nitab4.5_0000146g0080 Nicotiana tabacum HOM05D007857 ORTHO05D009355 5.1e-08 63.2 160 30.0
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 4.7e-06 56.6 106 34.0


User provided reference genes

Program Settings