Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.3e-246 855.9 408 100.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.2e-243 845.1 408 97.8
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.4e-242 842.4 408 97.8
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.9e-242 842.0 408 97.8
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.9e-242 842.0 408 97.5
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.9e-242 842.0 408 97.5
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.2e-242 841.3 408 97.3
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 4.2e-242 840.9 408 98.3
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 5.5e-242 840.5 408 97.1
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 5.5e-242 840.5 408 97.3
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 7.2e-242 840.1 408 96.8
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 7.2e-242 840.1 408 97.1
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 7.2e-242 840.1 408 97.3
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 1.6e-241 839.0 407 97.5
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 2.7e-241 838.2 408 97.5
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 2.7e-241 838.2 408 97.1
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 3.6e-241 837.8 408 97.3
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 4.6e-241 837.4 408 96.8
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 4.6e-241 837.4 407 96.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 6.1e-241 837.0 407 97.1
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 7.9e-241 836.6 408 97.3
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.0e-240 836.3 407 97.1
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.4e-240 835.9 408 97.1
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.8e-240 835.5 408 96.8
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.1e-240 833.9 407 96.1
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 5.1e-240 833.9 408 95.6
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 5.1e-240 833.9 408 96.6
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 6.7e-240 833.6 408 95.8
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 8.8e-240 833.2 408 95.8
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 8.8e-240 833.2 408 96.6
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.1e-239 832.8 407 96.3
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 1.1e-239 832.8 407 96.3
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 1.1e-239 832.8 408 95.3
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.1e-239 832.8 405 97.0
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.9e-239 832.0 407 95.1
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 1.9e-239 832.0 408 95.8
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.9e-239 832.0 408 95.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.9e-239 832.0 405 96.8
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.5e-239 831.6 408 95.8
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.5e-239 831.6 408 96.1
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 2.5e-239 831.6 408 96.1
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 3.3e-239 831.2 408 96.3
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 3.3e-239 831.2 408 96.3
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 5.7e-239 830.5 408 96.1
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 5.7e-239 830.5 407 95.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 5.7e-239 830.5 407 95.6
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.4e-239 830.1 408 95.8
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 7.4e-239 830.1 408 96.1
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.7e-238 828.9 408 96.1
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 2.2e-238 828.6 408 95.6
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 2.8e-238 828.2 407 95.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 3.7e-238 827.8 405 95.6
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 3.7e-238 827.8 405 95.6
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 3.7e-238 827.8 408 94.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 4.8e-238 827.4 408 95.3
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 4.8e-238 827.4 408 95.3
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 4.8e-238 827.4 408 95.8
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 6.3e-238 827.0 407 95.8
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 6.3e-238 827.0 407 95.3
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 8.2e-238 826.6 408 95.3
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.1e-237 826.2 405 95.3
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.1e-237 826.2 405 95.6
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.4e-237 825.9 408 95.3
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.8e-237 825.5 408 95.1
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.8e-237 825.5 408 95.1
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 1.8e-237 825.5 406 94.8
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.4e-237 825.1 408 94.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 2.4e-237 825.1 407 95.1
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 94.9
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 94.9
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.3
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 94.9
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 3.1e-237 824.7 408 95.1
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 4.1e-237 824.3 408 94.9
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 4.1e-237 824.3 408 94.4
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 5.3e-237 823.9 408 94.9
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 6.9e-237 823.5 408 95.1
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 9.1e-237 823.2 408 94.1
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.5e-236 822.4 407 94.8
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.5e-236 822.4 408 94.4
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 1.5e-236 822.4 407 95.3
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.5e-236 822.4 408 94.6
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 2.0e-236 822.0 407 94.8
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.0e-236 822.0 408 94.4
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 2.0e-236 822.0 407 94.3
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 2.0e-236 822.0 407 94.6
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.0e-236 822.0 408 94.6
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 2.6e-236 821.6 407 94.6
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.6e-236 821.6 407 94.3
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 3.4e-236 821.2 408 94.4
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 3.4e-236 821.2 407 94.8
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 4.5e-236 820.8 408 93.9
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 4.5e-236 820.8 407 94.3
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 5.9e-236 820.5 408 94.1
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 5.9e-236 820.5 408 93.9
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 5.9e-236 820.5 408 94.6
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.0e-235 819.7 409 94.9
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 1.3e-235 819.3 408 94.1
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 2.2e-235 818.5 402 94.8
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 2.2e-235 818.5 407 93.9
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 2.2e-235 818.5 407 93.9
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 3.8e-235 817.8 407 94.1
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 6.5e-235 817.0 401 94.8
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 3.2e-234 814.7 407 93.6
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 3.2e-234 814.7 400 95.0
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 9.4e-234 813.1 401 94.8
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.4e-229 799.3 407 92.4
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 5.3e-229 797.3 408 92.6
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.0e-228 795.4 400 93.0
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 2.6e-228 795.0 403 91.1
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 2.2e-227 792.0 384 97.4
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.8e-227 791.2 400 92.5
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.4e-226 789.3 410 91.0
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 2.5e-226 788.5 407 90.7
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 3.2e-226 788.1 381 96.6
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 3.6e-225 784.6 403 90.3
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.6e-223 778.5 401 89.5
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 9.7e-215 750.0 405 85.9
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 4.4e-207 724.5 396 83.1
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 2.2e-206 722.2 408 82.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 2.4e-205 718.8 401 82.3
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.9e-203 711.8 407 83.8
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.0e-192 675.2 346 92.5
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 8.9e-192 673.7 324 97.5
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.1e-186 656.8 408 79.2
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 3.1e-184 648.7 395 74.4
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 8.3e-182 640.6 315 96.2
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.4e-181 639.0 314 95.9
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 6.8e-168 594.3 290 94.8
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.9e-155 552.0 407 69.0
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.4e-149 532.7 279 90.0
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 5.6e-146 521.5 253 96.0
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.1e-145 519.6 408 66.2
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.4e-144 516.2 407 65.8
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.1e-144 515.8 407 65.6
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.8e-134 482.3 332 73.5
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.7e-126 456.8 293 73.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.1e-116 421.8 203 97.0
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.5e-98 361.7 191 88.5
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 7.5e-98 361.7 180 90.6
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.0e-94 351.3 172 97.7
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 8.5e-94 348.2 171 96.5
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 2.5e-77 293.5 146 93.8
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 9.5e-69 265.0 146 85.6
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 6.8e-67 258.8 127 96.9
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 3.5e-63 246.5 127 88.2
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 5.8e-58 229.2 407 37.6
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.3e-54 218.0 259 44.4
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 5.6e-53 212.6 100 98.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.4e-50 203.0 102 92.2
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 4.8e-44 183.0 84 98.8
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 8.1e-36 155.6 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 4.0e-35 153.3 77 94.8
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 4.0e-35 153.3 77 94.8
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 4.9e-33 146.4 68 97.1
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 4.3e-29 133.3 69 94.2
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 5.6e-29 132.9 197 37.6
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-28 131.7 71 88.7
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.0e-27 126.7 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.0e-27 126.7 65 92.3
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.3e-27 126.3 68 86.8
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-25 120.9 66 86.4
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.9e-25 119.8 66 84.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.9e-22 110.2 83 66.3
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 1.6e-20 104.8 67 70.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.1e-20 104.4 48 95.8
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.0e-17 95.5 48 91.7
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 4.3e-13 80.1 71 56.3
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 7.4e-13 79.3 72 56.9
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.6e-12 78.2 72 56.9
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.7e-09 68.2 61 57.4
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 3.2e-08 63.9 42 64.3
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 7.2e-08 62.8 29 89.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.6e-07 61.6 136 33.8
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 1.8e-06 58.2 40 67.5


User provided reference genes

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