Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 2.3e-151 538.9 272 100.0
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 4.6e-120 434.9 272 78.7
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.4e-116 423.3 257 82.1
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 7.7e-107 391.0 271 72.7
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 1.0e-106 390.6 272 72.8
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 1.0e-106 390.6 272 72.8
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 1.2e-104 383.6 272 69.1
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.6e-104 383.3 272 70.2
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.9e-103 378.6 272 67.6
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 6.7e-103 377.9 272 67.3
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 6.7e-103 377.9 272 68.8
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 3.3e-102 375.6 272 68.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 1.8e-100 369.8 275 67.3
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 2.4e-100 369.4 272 68.8
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.1e-100 369.0 272 66.5
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 5.3e-100 368.2 273 68.1
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.0e-99 366.3 273 68.1
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.3e-98 363.6 272 65.8
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 8.5e-98 360.9 269 66.2
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 9.4e-97 357.5 272 67.3
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.7e-96 355.9 273 65.9
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 4.7e-96 355.1 259 69.1
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 4.7e-96 355.1 260 67.3
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 2.0e-94 349.7 272 65.1
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 4.4e-94 348.6 256 67.6
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 2.2e-93 346.3 256 68.4
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 8.2e-93 344.4 272 64.0
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.8e-92 343.2 272 63.2
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 4.1e-92 342.0 269 64.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 7.0e-92 341.3 272 64.0
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 9.1e-92 340.9 273 63.4
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 1.6e-91 340.1 272 64.0
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.9e-91 338.2 272 64.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 3.2e-89 332.4 272 62.9
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.2e-88 330.5 272 60.7
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 1.6e-88 330.1 272 62.1
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.7e-88 329.3 273 63.4
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 6.1e-88 328.2 272 61.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 8.0e-88 327.8 272 61.8
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 1.0e-87 327.4 272 60.3
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.0e-87 327.4 272 62.1
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 2.3e-87 326.2 274 62.0
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 8.8e-87 324.3 272 61.4
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 4.4e-86 322.0 275 61.5
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.3e-85 320.5 272 60.7
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.7e-85 320.1 272 61.0
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 2.8e-85 319.3 272 59.9
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.4e-84 316.2 272 58.8
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 3.1e-84 315.8 275 60.4
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 3.1e-84 315.8 275 60.4
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 1.2e-83 313.9 272 60.3
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 1.2e-83 313.9 272 60.3
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 1.6e-83 313.5 272 57.0
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.6e-83 313.5 244 64.8
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 2.7e-83 312.8 275 59.3
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 7.7e-83 311.2 275 58.9
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.0e-82 310.8 275 58.5
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 1.0e-82 310.8 272 57.7
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 3.8e-82 308.9 272 57.7
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 1.5e-81 307.0 273 58.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 4.2e-81 305.4 262 58.0
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 2.1e-80 303.1 247 59.5
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.7e-80 302.8 275 58.2
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 2.3e-79 299.7 279 56.3
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 2.3e-79 299.7 279 56.3
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 5.2e-79 298.5 252 61.1
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-78 297.4 277 56.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 1.2e-78 297.4 277 56.3
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 1.2e-78 297.4 278 57.2
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.2e-78 297.4 255 61.2
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.5e-78 297.0 272 57.7
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 2.0e-78 296.6 278 57.2
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 3.4e-78 295.8 216 69.4
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.1e-76 290.8 247 62.8
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 4.1e-76 288.9 201 69.7
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 7.0e-76 288.1 274 55.8
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 9.1e-76 287.7 268 57.1
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 9.1e-76 287.7 281 56.2
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 2.7e-75 286.2 283 55.8
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 4.5e-75 285.4 247 61.9
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 9.4e-73 277.7 269 55.8
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.1e-72 276.6 274 54.0
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 8.0e-72 274.6 219 61.2
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.1e-68 264.2 278 52.2
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 3.1e-68 262.7 278 52.5
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 1.5e-65 253.8 261 53.6
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.0e-63 247.7 273 50.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.2e-63 245.4 240 57.9
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 8.3e-61 238.0 271 46.9
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 4.6e-59 232.3 270 44.8
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 7.3e-57 224.9 270 45.2
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.1e-56 223.4 272 47.1
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.1e-56 223.4 272 47.1
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.2e-54 217.6 250 47.6
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 1.5e-54 217.2 247 48.6
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 5.8e-54 215.3 272 46.0
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 6.4e-53 211.8 246 49.2
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.2e-52 209.5 266 44.4
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 1.6e-51 207.2 272 45.6
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.6e-51 207.2 163 63.2
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 1.5e-49 200.7 246 48.0
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 1.9e-49 200.3 248 47.2
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 7.5e-46 188.3 274 42.3
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.2e-45 186.8 201 49.8
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.7e-45 186.0 201 48.3
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.4e-44 183.3 245 43.7
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 3.8e-37 159.5 239 42.3
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 8.9e-31 138.3 226 41.2
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.2e-28 129.4 88 71.6
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 4.2e-28 129.4 227 37.9
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 1.2e-27 127.9 245 35.9
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 4.6e-27 125.9 245 36.7
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.1e-25 121.3 159 45.9
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.2e-22 111.3 226 33.2
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 1.3e-21 107.8 123 45.5
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 3.8e-21 106.3 111 55.0
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 9.3e-20 101.7 113 46.0
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.3e-17 93.2 102 47.1
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 1.2e-11 74.7 61 59.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 8.7e-10 68.6 51 56.9
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 3.7e-08 63.2 40 75.0


User provided reference genes

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