Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G095500 Carya illinoinensis HOM05D007623 ORTHO05D009641 9.4e-180 634.8 836 100.0
Haze_11851 Corylus avellana HOM05D007623 ORTHO05D009641 1.8e-135 487.6 313 76.7
Cfa008839 Carpinus fangiana HOM05D007623 ORTHO05D009641 4.6e-134 483.0 313 76.0
MD16G1054700 Malus domestica HOM05D007623 ORTHO05D009641 2.9e-104 384.0 302 63.9
Thecc.02G321100 Theobroma cacao HOM05D007623 ORTHO05D009641 3.9e-101 373.6 306 60.8
Manes.14G091100 Manihot esculenta HOM05D007623 ORTHO05D009641 1.5e-100 371.7 310 61.3
Prupe.2G062100 Prunus persica HOM05D007623 ORTHO05D009641 2.1e-99 367.9 311 59.5
Gorai.005G147900 Gossypium raimondii HOM05D007623 ORTHO05D009641 2.4e-98 364.4 301 61.8
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 3.1e-98 364.0 309 60.8
Gohir.A03G106900 Gossypium hirsutum HOM05D007623 ORTHO05D009641 3.1e-98 364.0 301 61.5
RcHm_v2.0_Chr4g0437181 Rosa chinensis HOM05D007623 ORTHO05D009641 6.4e-96 356.3 314 58.6
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 8.4e-96 355.9 312 57.7
GSVIVG01010112001 Vitis vinifera HOM05D007623 ORTHO05D009641 1.9e-95 354.8 307 60.6
Dinv34009 Davidia involucrata HOM05D007623 ORTHO05D009641 3.2e-95 354.0 308 56.2
COL.COLO4_27779 Corchorus olitorius HOM05D007623 ORTHO05D009641 2.1e-94 351.3 306 58.8
FvH4_4g29120 Fragaria vesca HOM05D007623 ORTHO05D009641 3.0e-93 347.4 309 57.0
FAN12G1349 Fragaria x ananassa HOM05D007623 ORTHO05D009641 8.7e-93 345.9 307 57.3
FAN17G1802 Fragaria x ananassa HOM05D007623 ORTHO05D009641 2.5e-92 344.4 312 55.8
FAN22G0497 Fragaria x ananassa HOM05D007623 ORTHO05D009641 4.3e-92 343.6 309 56.3
ClCG05G023480 Citrullus lanatus HOM05D007623 ORTHO05D009641 1.6e-91 341.7 301 56.8
Sed0026487 Sechium edule HOM05D007623 ORTHO05D009641 3.6e-91 340.5 314 53.8
MELO3C026661.2 Cucumis melo HOM05D007623 ORTHO05D009641 9.9e-89 332.4 315 54.0
Atru.chr11.1545 Acer truncatum HOM05D007623 ORTHO05D009641 1.3e-88 332.0 315 55.2
Actinidia24041 Actinidia chinensis HOM05D007623 ORTHO05D009641 3.2e-87 327.4 312 54.8
Lj6A773T130 Lonicera japonica HOM05D007623 ORTHO05D009641 1.5e-84 318.5 318 52.5
Actinidia31923 Actinidia chinensis HOM05D007623 ORTHO05D009641 3.3e-84 317.4 312 53.8
CsaV3_3G030580 Cucumis sativus L. HOM05D007623 ORTHO05D009641 9.6e-84 315.8 315 52.7
vmacro01293 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 2.1e-83 314.7 307 53.1
Hund25149 Selenicereus undatus HOM05D007623 ORTHO05D009641 1.2e-81 308.9 325 49.8
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 3.0e-77 294.3 312 49.4
SHI04831 Sapria himalayana HOM05D007623 ORTHO05D009641 1.3e-75 288.9 270 54.4
CSS0034887 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 2.8e-75 287.7 310 48.7
Nn1g03057 Nelumbo nucifera HOM05D007623 ORTHO05D009641 2.8e-75 287.7 330 47.6
AL1G25410 Arabidopsis lyrata HOM05D007623 ORTHO05D009641 1.5e-73 282.0 290 50.0
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 1.1e-71 275.8 296 47.0
Aqoxy1G01216 Aquilegia oxysepala HOM05D007623 ORTHO05D009641 1.4e-71 275.4 309 47.2
Prupe.7G020300 Prunus persica HOM05D007623 ORTHO05D009641 7.2e-71 273.1 254 55.5
HanXRQChr08g0215011 Helianthus annuus HOM05D007623 ORTHO05D009641 1.2e-70 272.3 315 47.6
Lsat_1_v5_gn_6_31920 Lactuca sativa HOM05D007623 ORTHO05D009641 6.1e-70 270.0 298 47.7
EL10Ac6g14659 Beta vulgaris HOM05D007623 ORTHO05D009641 6.9e-66 256.5 273 50.2
DCAR_023738 Daucus carota HOM05D007623 ORTHO05D009641 6.9e-66 256.5 261 49.0
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 1.5e-65 255.4 232 53.4
Sp1g12290 Schrenkiella parvula HOM05D007623 ORTHO05D009641 1.9e-63 248.4 268 48.9
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 1.9e-63 248.4 234 49.1
THA.LOC104805220 Tarenaya hassleriana HOM05D007623 ORTHO05D009641 1.9e-63 248.4 266 48.5
Thhalv10009738m.g Eutrema salsugineum HOM05D007623 ORTHO05D009641 7.2e-63 246.5 291 45.7
Rhsim12G0070700 Rhododendron simsii HOM05D007623 ORTHO05D009641 2.7e-62 244.6 276 50.7
Carub.0001s1335 Capsella rubella HOM05D007623 ORTHO05D009641 1.0e-61 242.7 268 48.1
BcaC05g25269 Brassica carinata HOM05D007623 ORTHO05D009641 1.8e-61 241.9 266 49.2
AUR62007860 Chenopodium quinoa HOM05D007623 ORTHO05D009641 1.5e-60 238.8 253 50.2
BcaB02g06459 Brassica carinata HOM05D007623 ORTHO05D009641 7.4e-60 236.5 266 48.9
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 2.8e-59 234.6 294 43.5
AUR62003048 Chenopodium quinoa HOM05D007623 ORTHO05D009641 5.3e-58 230.3 275 47.3
BraA06t24162Z Brassica rapa HOM05D007623 ORTHO05D009641 4.2e-55 220.7 271 46.1
A06p09730 Brassica napus HOM05D007623 ORTHO05D009641 5.5e-55 220.3 271 45.8
C05p11430 Brassica napus HOM05D007623 ORTHO05D009641 7.2e-55 219.9 266 45.9
Cc11_g11460 Coffea canephora HOM05D007623 ORTHO05D009641 9.4e-55 219.5 273 46.5
Ah.03g137460 Amaranthus hybridus HOM05D007623 ORTHO05D009641 1.4e-53 215.7 252 44.4
MD13G1055600 Malus domestica HOM05D007623 ORTHO05D009641 2.0e-52 211.8 153 67.3
Sc11g0002680 Simmondsia chinensis HOM05D007623 ORTHO05D009641 5.7e-52 210.3 168 59.5
Oeu019601.2 Olea europaea HOM05D007623 ORTHO05D009641 7.4e-52 209.9 197 52.3
BolC5t29896H Brassica oleracea HOM05D007623 ORTHO05D009641 1.4e-50 205.7 261 44.4
Migut.E00256 Erythranthe guttata HOM05D007623 ORTHO05D009641 1.9e-47 195.3 276 42.8
Gohir.D02G132000 Gossypium hirsutum HOM05D007623 ORTHO05D009641 1.6e-41 175.6 127 66.9
SGA_v2.0_scaffold287G47196 Striga asiatica HOM05D007623 ORTHO05D009641 4.5e-41 174.1 254 38.2
Ciclev10031004m.g Citrus clementina HOM05D007623 ORTHO05D009641 2.2e-40 171.8 124 62.9
Zm00001eb045730 Zea mays HOM05D007623 ORTHO05D009641 4.7e-38 164.1 165 47.3
TAR374G0443 Trochodendron aralioides HOM05D007623 ORTHO05D009641 6.1e-38 163.7 126 57.9
ATR0048G027 Amborella trichopoda HOM05D007623 ORTHO05D009641 1.7e-35 155.6 152 46.1
Peaxi162Scf00188g01015 Petunia axillaris HOM05D007623 ORTHO05D009641 2.4e-34 151.8 122 58.2
AT1G13630 Arabidopsis thaliana HOM05D007623 ORTHO05D009641 2.0e-33 148.7 130 53.8
HPP92_001379 Vanilla planifolia HOM05D007623 ORTHO05D009641 2.0e-33 148.7 189 43.4
Cpa.g.c32845 Carica papaya HOM05D007623 ORTHO05D009641 1.7e-32 145.6 152 53.3
Lsat_1_v5_gn_3_22320 Lactuca sativa HOM05D007623 ORTHO05D009641 8.0e-30 136.7 184 44.0
Nitab4.5_0000259g0170 Nicotiana tabacum HOM05D007623 ORTHO05D009641 3.0e-29 134.8 125 52.0
Nitab4.5_0011373g0020 Nicotiana tabacum HOM05D007623 ORTHO05D009641 6.8e-29 133.7 124 52.4
BcaB08g34697 Brassica carinata HOM05D007623 ORTHO05D009641 4.4e-28 131.0 129 52.7
CARHR013990 Cardamine hirsuta HOM05D007623 ORTHO05D009641 4.9e-27 127.5 115 53.9
TAR374G1445 Trochodendron aralioides HOM05D007623 ORTHO05D009641 1.2e-25 122.9 152 44.7
Eucgr.I00129 Eucalyptus grandis HOM05D007623 ORTHO05D009641 1.1e-23 116.3 86 65.1
Cpa.g.sc998.1 Carica papaya HOM05D007623 ORTHO05D021352 1.6e-22 112.5 87 60.9
CAN.G680.12 Capsicum annuum HOM05D007623 ORTHO05D009641 4.7e-22 110.9 95 54.7
BcaB06g28282 Brassica carinata HOM05D007623 ORTHO05D009641 8.0e-22 110.2 126 48.4
CARHR014000 Cardamine hirsuta HOM05D007623 ORTHO05D009641 1.8e-21 109.0 136 45.6
SEGI_39043 Sequoiadendron giganteum HOM05D007623 ORTHO05D009641 1.3e-19 102.8 185 27.0
Ah.10g029280 Amaranthus hybridus HOM05D007623 ORTHO05D009641 9.5e-15 86.7 128 40.6
Lalb_Chr02g0154661 Lupinus albus HOM05D007291 ORTHO05D009038 3.6e-14 84.7 234 24.8
Prupe.7G020200 Prunus persica HOM05D030010 ORTHO05D021352 3.6e-14 84.7 62 59.7
Potri.010G137200 Populus trichocarpa HOM05D007623 ORTHO05D009641 1.4e-13 82.8 59 64.4
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 1.8e-13 82.4 211 23.7
Lalb_Chr01g0001971 Lupinus albus HOM05D002890 ORTHO05D009847 2.3e-13 82.0 199 25.1
Solyc05g010780.1 Solanum lycopersicum HOM05D007623 ORTHO05D009641 4.0e-13 81.3 80 55.0
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 5.2e-13 80.9 199 26.6
Rhsim13G0154100 Rhododendron simsii HOM05D002890 ORTHO05D009847 4.4e-12 77.8 210 25.2
Aqoxy1G02998 Aquilegia oxysepala HOM05D007623 ORTHO05D021352 1.3e-11 76.3 81 50.6
arahy.Tifrunner.gnm1.ann1.GQ8ZCN Arachis hypogaea HOM05D002890 ORTHO05D009847 2.2e-11 75.5 203 24.6
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 2.2e-11 75.5 211 25.6
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 2.9e-11 75.1 199 24.6
SEGI_32122 Sequoiadendron giganteum HOM05D007291 ORTHO05D009038 4.9e-11 74.3 211 23.2
HPP92_001923 Vanilla planifolia HOM05D007455 ORTHO05D009431 1.9e-10 72.4 174 26.4
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 2.4e-10 72.0 211 25.1
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 3.2e-10 71.6 220 25.9
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 4.1e-10 71.2 165 26.7
TWI74G1032 Tripterygium wilfordii HOM05D007291 ORTHO05D009038 7.0e-10 70.5 227 24.2
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 9.2e-10 70.1 169 23.1
Duzib235G0255 Durio zibethinus HOM05D002890 ORTHO05D009847 9.2e-10 70.1 217 26.7
Potri.001G276500 Populus trichocarpa HOM05D007455 ORTHO05D009431 9.2e-10 70.1 156 26.9
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 1.2e-09 69.7 166 26.5
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 1.6e-09 69.3 211 23.2
BcaB01g06086 Brassica carinata HOM05D007455 ORTHO05D009431 2.0e-09 68.9 183 26.8
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 2.7e-09 68.6 250 24.0
Rhsim08G0018600 Rhododendron simsii HOM05D001542 ORTHO05D001416 2.7e-09 68.6 270 23.3
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 2.7e-09 68.6 157 26.8
BcaB01g06201 Brassica carinata HOM05D007455 ORTHO05D009431 3.5e-09 68.2 183 26.8
Lsat_1_v5_gn_9_106260 Lactuca sativa HOM05D007455 ORTHO05D009431 3.5e-09 68.2 188 23.4
Solyc05g051340.3 Solanum lycopersicum HOM05D007291 ORTHO05D009038 3.5e-09 68.2 265 24.2
CSS0035807 Camellia sinensis var. sinensis HOM05D007455 ORTHO05D009431 6.0e-09 67.4 165 26.7
CsaV3_1G043280 Cucumis sativus L. HOM05D007455 ORTHO05D009431 7.8e-09 67.0 230 25.7
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 1.0e-08 66.6 216 24.1
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 1.0e-08 66.6 195 23.6
Aqoxy3G02430 Aquilegia oxysepala HOM05D007291 ORTHO05D009038 1.3e-08 66.2 234 23.1
Solyc05g010790.3 Solanum lycopersicum HOM05D007623 ORTHO05D009641 1.3e-08 66.2 78 38.5
A03p00400 Brassica napus HOM05D007455 ORTHO05D009431 1.7e-08 65.9 183 26.8
Manes.01G179100 Manihot esculenta HOM05D007455 ORTHO05D009431 1.7e-08 65.9 161 25.5
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 2.3e-08 65.5 238 26.5
arahy.Tifrunner.gnm1.ann1.NUL68I Arachis hypogaea HOM05D002890 ORTHO05D009847 3.0e-08 65.1 168 25.0
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 3.9e-08 64.7 206 24.3
Sabra04G0061000 Salix brachista HOM05D007291 ORTHO05D009038 5.0e-08 64.3 238 21.0
MELO3C015131.2 Cucumis melo HOM05D007455 ORTHO05D009431 1.1e-07 63.2 246 24.0
Manes.01G179300 Manihot esculenta HOM05D007455 ORTHO05D009431 1.1e-07 63.2 154 25.3
Oeu039576.1 Olea europaea HOM05D007455 ORTHO05D009431 1.1e-07 63.2 164 26.8
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 1.5e-07 62.8 203 22.7
CiPaw.09G092100 Carya illinoinensis HOM05D002890 ORTHO05D009847 1.5e-07 62.8 185 25.9
ClCG03G012670 Citrullus lanatus HOM05D007455 ORTHO05D009431 1.5e-07 62.8 228 25.0
Lsat_1_v5_gn_2_69440 Lactuca sativa HOM05D007291 ORTHO05D009038 1.5e-07 62.8 181 22.7
PGSC0003DMG401009622 Solanum tuberosum HOM05D007455 ORTHO05D009431 1.5e-07 62.8 155 25.8
Haze_20536 Corylus avellana HOM05D002890 ORTHO05D009847 3.3e-07 61.6 167 25.1
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 3.3e-07 61.6 171 24.6
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 4.3e-07 61.2 215 21.9
Ah.14g088580 Amaranthus hybridus HOM05D007291 ORTHO05D009038 5.6e-07 60.8 194 23.7
Lsat_1_v5_gn_3_22340 Lactuca sativa HOM05D007623 ORTHO05D009641 7.3e-07 60.5 56 48.2
EL10Ac6g15337 Beta vulgaris HOM05D006931 ORTHO05D008782 1.2e-06 59.7 152 23.0
FvH4_3g42580 Fragaria vesca HOM05D000002 ORTHO05D000001 1.6e-06 59.3 106 31.1
Potri.004G090800 Populus trichocarpa HOM05D007291 ORTHO05D009038 1.6e-06 59.3 204 21.1
Haze_23220 Corylus avellana HOM05D007455 ORTHO05D009431 2.1e-06 58.9 151 26.5
Dinv28212 Davidia involucrata HOM05D007291 ORTHO05D009038 2.1e-06 58.9 145 25.5
Sed0025332 Sechium edule HOM05D007455 ORTHO05D009431 2.1e-06 58.9 157 26.1
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 2.8e-06 58.5 173 24.3
FAN11G0418 Fragaria x ananassa HOM05D003757 ORTHO05D000090 3.6e-06 58.2 106 30.2
PSO339G2893 Papaver somniferum HOM05D007455 ORTHO05D009431 3.6e-06 58.2 170 23.5
COL.COLO4_05199 Corchorus olitorius HOM05D007455 ORTHO05D009431 4.7e-06 57.8 239 24.7
Sc16g0011110 Simmondsia chinensis HOM05D007455 ORTHO05D009431 4.7e-06 57.8 157 26.1
THA.LOC104805375 Tarenaya hassleriana HOM05D007358 ORTHO05D009117 4.7e-06 57.8 165 24.8
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 6.2e-06 57.4 160 21.2
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 8.1e-06 57.0 173 27.2


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