Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 1.4e-69 266.2 132 100.0
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 2.5e-31 139.0 136 61.0
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 2.8e-22 109.0 105 58.1
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 1.1e-21 107.1 94 63.8
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 2.4e-21 105.9 134 45.5
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 5.3e-21 104.8 134 45.5
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 1.5e-20 103.2 134 45.5
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 3.4e-20 102.1 136 51.5
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 2.1e-17 92.8 133 41.4
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 2.7e-17 92.4 143 44.8
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 1.8e-16 89.7 138 42.8
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 5.2e-16 88.2 141 41.8
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 7.4e-15 84.3 137 41.6
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 2.2e-14 82.8 133 43.6
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 1.1e-13 80.5 137 39.4
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 2.4e-13 79.3 133 36.8
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 2.4e-13 79.3 143 42.7
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 4.1e-13 78.6 147 39.5
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 5.3e-13 78.2 134 41.0
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 1.2e-12 77.0 138 39.1
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 2.0e-12 76.3 140 40.0
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 2.2e-11 72.8 135 40.7
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 3.8e-11 72.0 143 35.0
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 3.8e-11 72.0 147 40.1
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 8.5e-11 70.9 142 35.2
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 8.5e-11 70.9 110 37.3
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 1.5e-10 70.1 109 36.7
FvH4_4g29280 Fragaria vesca HOM05D023608 ORTHO05D010565 1.9e-10 69.7 141 41.1
FAN12G2598 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.9e-10 69.7 141 41.1
FAN17G1069 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.9e-10 69.7 139 40.3
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 2.5e-10 69.3 146 36.3
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 2.5e-10 69.3 144 34.7
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 2.5e-10 69.3 141 35.5
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 3.2e-10 68.9 143 37.8
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 1.6e-09 66.6 124 38.7
FAN22G1173 Fragaria x ananassa HOM05D023608 ORTHO05D010565 2.1e-09 66.2 142 39.4
Aqoxy3G00550 Aquilegia oxysepala HOM05D008548 ORTHO05D010565 8.0e-09 64.3 114 36.0
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 1.0e-08 63.9 136 34.6
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 2.3e-08 62.8 145 37.2
vmacro01297 Vaccinium macrocarpon HOM05D008548 ORTHO05D010565 4.0e-08 62.0 44 56.8
arahy.Tifrunner.gnm1.ann1.BD088N Arachis hypogaea HOM05D008548 ORTHO05D010565 5.2e-08 61.6 136 30.9
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 8.8e-08 60.8 130 33.8
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 1.5e-07 60.1 92 40.2
arahy.Tifrunner.gnm1.ann1.Y4YZ09 Arachis hypogaea HOM05D008548 ORTHO05D010565 2.0e-07 59.7 136 30.1
MD16G1055300 Malus domestica HOM05D008548 ORTHO05D010565 2.0e-07 59.7 140 38.6
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 2.0e-07 59.7 91 42.9
Sed0002945 Sechium edule HOM05D024428 ORTHO05D025076 2.6e-07 59.3 130 35.4
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 7.5e-07 57.8 130 35.4
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 7.5e-07 57.8 39 69.2
ClCG05G023540 Citrullus lanatus HOM05D024428 ORTHO05D025076 1.3e-06 57.0 135 34.8
MD13G1056400 Malus domestica HOM05D008548 ORTHO05D010565 1.3e-06 57.0 149 36.2


User provided reference genes

Program Settings