Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 7.5e-165 583.9 331 100.0
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 7.6e-101 371.3 329 77.5
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 4.2e-91 339.0 330 68.5
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 1.1e-86 324.3 329 69.3
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 1.8e-86 323.6 336 69.3
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 9.4e-83 311.2 329 67.8
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 3.7e-79 299.3 329 66.9
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 2.4e-78 296.6 329 65.3
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 1.9e-75 287.0 329 61.1
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 5.5e-75 285.4 329 61.7
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 9.4e-75 284.6 328 64.0
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.2e-73 278.9 331 60.7
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.3e-72 276.2 331 60.4
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.3e-72 276.2 331 60.4
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.7e-71 273.9 329 59.6
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 6.3e-71 271.9 329 60.2
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 8.2e-71 271.6 330 61.5
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-70 271.2 329 52.9
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 2.9e-68 263.1 344 60.5
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 4.2e-67 259.2 339 62.5
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 8.8e-65 251.5 327 59.6
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 8.8e-65 251.5 335 60.0
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 2.6e-64 250.0 339 61.4
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 4.4e-64 249.2 337 51.3
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 2.8e-63 246.5 345 60.6
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 4.8e-63 245.7 338 61.2
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.4e-62 242.3 329 59.3
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.8e-60 236.1 329 58.4
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 5.5e-59 232.3 331 56.5
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 2.1e-58 230.3 338 57.7
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 3.6e-58 229.6 339 59.0
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.3e-57 226.9 343 45.8
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 2.6e-56 223.4 352 54.8
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 3.4e-56 223.0 343 54.5
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.8e-54 217.2 267 53.2
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 3.5e-53 213.0 330 53.0
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 4.5e-53 212.6 332 53.6
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 4.5e-53 212.6 315 55.2
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 5.0e-52 209.1 339 50.4
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 1.1e-51 208.0 358 51.4
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 4.3e-51 206.1 329 54.7
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 7.3e-51 205.3 354 53.1
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.1e-50 203.8 269 49.1
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 3.6e-50 203.0 314 50.3
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 8.0e-50 201.8 355 53.0
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.0e-49 199.5 333 52.3
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.0e-49 199.5 333 52.3
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 6.8e-49 198.7 337 50.1
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 6.8e-49 198.7 340 52.1
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.2e-48 198.0 322 42.9
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 4.4e-48 196.1 346 52.9
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 5.7e-48 195.7 362 53.6
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 5.7e-48 195.7 332 50.6
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.3e-47 194.5 329 41.6
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.2e-47 193.7 316 51.9
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 2.9e-47 193.4 341 41.6
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 8.3e-47 191.8 339 49.0
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.8e-46 190.7 338 48.2
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.4e-46 190.3 315 49.8
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.2e-46 189.9 343 53.4
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 7.0e-46 188.7 346 53.2
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 7.0e-46 188.7 345 53.9
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 2.0e-45 187.2 327 46.8
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 2.0e-45 187.2 327 46.8
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.0e-45 187.2 333 49.2
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 2.7e-45 186.8 345 53.3
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.7e-45 186.8 345 53.3
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.7e-44 184.1 361 51.8
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 6.6e-44 182.2 328 47.6
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 6.6e-44 182.2 353 39.7
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 8.6e-44 181.8 354 40.4
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.1e-43 181.4 339 44.2
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.9e-43 180.6 336 42.0
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 4.3e-43 179.5 229 65.1
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 2.1e-42 177.2 348 39.4
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 1.4e-41 174.5 341 47.2
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 8.9e-41 171.8 358 40.2
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 8.9e-41 171.8 357 39.8
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 1.2e-40 171.4 342 43.6
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 1.5e-40 171.0 302 45.0
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 1.4e-38 164.5 348 50.9
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.4e-38 164.5 355 46.8
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.4e-38 164.5 355 46.8
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.4e-38 164.5 355 46.8
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.9e-38 164.1 311 50.2
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 9.2e-38 161.8 338 45.9
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 7.8e-37 158.7 337 42.1
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 3.9e-36 156.4 335 42.7
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.1e-35 154.8 375 46.1
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.9e-35 154.1 374 46.8
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 2.8e-34 150.2 331 41.7
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 3.6e-34 149.8 324 44.8
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.1e-33 148.3 225 56.9
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.4e-33 147.9 338 47.3
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 1.8e-33 147.5 329 45.9
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 6.8e-33 145.6 332 46.1
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 6.8e-33 145.6 173 52.6
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 1.5e-32 144.4 349 35.8
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 5.8e-32 142.5 330 40.3
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.3e-31 141.4 338 42.9
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.9e-31 140.2 315 46.3
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 3.7e-31 139.8 305 36.7
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.9e-30 137.5 332 48.5
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 3.2e-30 136.7 333 36.6
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.2e-29 134.8 350 43.4
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.2e-29 134.8 308 46.8
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 1.6e-29 134.4 339 44.0
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.6e-29 132.9 344 40.7
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 1.7e-28 131.0 348 43.1
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 2.3e-28 130.6 336 38.1
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 2.3e-28 130.6 349 43.8
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 3.0e-28 130.2 331 38.1
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 5.1e-28 129.4 351 45.0
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 6.6e-28 129.0 348 42.8
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 2.5e-27 127.1 346 38.7
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 5.6e-27 125.9 340 41.5
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 1.2e-26 124.8 348 43.1
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 1.2e-26 124.8 348 43.1
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 1.2e-26 124.8 348 43.1
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 2.8e-26 123.6 340 36.2
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 2.8e-26 123.6 353 38.5
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 4.0e-25 119.8 350 42.3
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 1.5e-24 117.9 341 41.3
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 1.5e-24 117.9 347 40.3
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 2.0e-24 117.5 342 40.9
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 3.4e-24 116.7 355 37.5
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 3.4e-24 116.7 251 50.6
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 4.4e-24 116.3 382 41.1
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 4.4e-24 116.3 341 34.6
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 2.2e-23 114.0 356 33.7
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 4.9e-23 112.8 353 39.7
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 1.4e-22 111.3 326 41.4
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 1.9e-22 110.9 341 40.8
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 1.9e-22 110.9 320 35.3
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 9.2e-22 108.6 347 40.3
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 1.2e-21 108.2 354 39.0
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 2.1e-21 107.5 218 37.6
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 7.8e-21 105.5 328 40.5
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 1.2e-18 98.2 315 32.4
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 6.2e-18 95.9 310 45.5
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 7.1e-14 82.4 317 35.0
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 1.2e-13 81.6 360 37.5
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 4.6e-13 79.7 315 29.8
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 6.0e-13 79.3 325 40.3
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 3.3e-11 73.6 301 29.6
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 1.3e-10 71.6 265 32.8
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 3.6e-10 70.1 269 33.1
TAR381G0317 Trochodendron aralioides HOM05D004533 ORTHO05D005347 4.0e-09 66.6 120 44.2
GSVIVG01012248001 Vitis vinifera HOM05D004533 ORTHO05D005347 5.3e-09 66.2 43 74.4
TAR627G0820 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.2e-08 65.1 118 44.9
HPP92_007737 Vanilla planifolia HOM05D004533 ORTHO05D005347 7.6e-08 62.4 298 27.9
TAR452G0003 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.4e-06 58.2 72 48.6
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 4.2e-06 56.6 311 30.2
Sabra06G0113200 Salix brachista HOM05D001488 ORTHO05D001456 9.3e-06 55.5 245 31.0


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