Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 2.2e-97 359.0 185 100.0
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.6e-63 246.5 186 71.5
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.1e-61 240.4 188 72.3
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 7.4e-61 237.7 188 71.8
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 5.5e-56 221.5 186 66.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.0e-54 217.2 186 65.1
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.3e-54 216.9 188 66.5
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.9e-53 213.0 178 66.3
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 5.7e-53 211.5 188 63.3
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.3e-52 210.3 146 76.7
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 2.8e-52 209.1 184 64.1
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 3.7e-52 208.8 191 62.8
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 6.3e-52 208.0 182 63.2
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.8e-51 206.5 132 80.3
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.4e-51 206.1 188 63.3
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.3e-51 204.9 189 63.0
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.2e-50 203.8 201 58.7
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.5e-50 203.4 129 80.6
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.5e-50 203.4 132 79.5
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 3.4e-50 202.2 128 77.3
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 3.4e-50 202.2 180 65.0
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 5.9e-50 201.4 163 67.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 5.9e-50 201.4 179 59.8
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.6e-50 201.1 178 59.0
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 7.6e-50 201.1 135 74.8
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.0e-49 200.7 186 60.8
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.0e-49 200.7 173 61.3
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.7e-49 199.9 183 62.8
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-49 199.9 188 59.6
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.7e-49 199.9 188 59.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 2.2e-49 199.5 198 61.6
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.2e-49 199.5 188 59.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.2e-49 199.5 163 63.8
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.9e-49 199.1 149 71.8
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 3.8e-49 198.7 180 60.0
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 5.0e-49 198.4 190 62.1
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 6.5e-49 198.0 158 64.6
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 6.5e-49 198.0 158 64.6
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.1e-48 197.2 187 61.5
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.1e-48 197.2 186 63.4
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.4e-48 196.8 168 66.7
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 2.5e-48 196.1 147 68.7
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 3.2e-48 195.7 195 58.5
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 9.3e-48 194.1 184 59.8
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.6e-47 193.4 187 58.8
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.1e-47 193.0 183 61.2
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 2.7e-47 192.6 192 56.8
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 4.6e-47 191.8 196 56.1
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 4.6e-47 191.8 175 61.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 6.1e-47 191.4 184 59.2
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.8e-46 189.9 190 56.3
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 5.1e-46 188.3 118 74.6
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 6.7e-46 188.0 119 75.6
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 8.7e-46 187.6 187 57.8
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 8.7e-46 187.6 207 54.6
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.1e-45 187.2 190 57.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.1e-45 187.2 124 72.6
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.5e-45 186.8 187 56.1
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.5e-45 186.8 200 55.0
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.3e-45 185.7 186 56.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 4.3e-45 185.3 185 56.8
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 5.7e-45 184.9 193 53.4
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 5.7e-45 184.9 191 53.9
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 9.7e-45 184.1 185 61.1
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.3e-44 183.7 180 56.1
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.6e-44 183.3 124 74.2
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.6e-44 183.3 198 53.0
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 3.7e-44 182.2 174 60.9
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 8.2e-44 181.0 107 82.2
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.1e-43 180.6 119 71.4
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 1.8e-43 179.9 195 54.9
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 4.1e-43 178.7 144 67.4
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 5.3e-43 178.3 186 57.5
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 6.9e-43 177.9 184 56.0
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 6.9e-43 177.9 187 55.6
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 9.1e-43 177.6 147 66.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.5e-42 176.8 144 66.7
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.5e-42 176.8 121 71.9
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 3.4e-42 175.6 186 57.0
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 5.9e-42 174.9 149 64.4
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.0e-41 174.1 144 66.0
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.3e-41 173.7 183 54.6
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.9e-41 172.6 130 64.6
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 2.9e-41 172.6 141 63.1
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.4e-40 170.2 163 55.8
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 1.9e-40 169.9 144 61.1
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.2e-40 169.1 164 57.3
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.2e-40 169.1 121 66.1
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 3.6e-39 165.6 150 60.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 3.6e-39 165.6 150 60.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 3.6e-39 165.6 150 60.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 3.6e-39 165.6 150 60.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 3.6e-39 165.6 150 60.0
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.6e-39 165.2 163 53.4
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.8e-38 163.3 104 75.0
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.0e-38 162.5 126 62.7
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.1e-35 154.1 166 48.8
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 4.1e-35 152.1 122 59.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.2e-34 150.6 116 61.2
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 6.5e-33 144.8 133 55.6
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.1e-29 134.0 112 65.2
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.1e-29 134.0 112 65.2
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.1e-29 134.0 112 65.2
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.3e-28 130.6 105 73.3
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 5.3e-27 125.2 120 51.7
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 8.5e-25 117.9 90 73.3
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.2e-23 114.0 120 52.5
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 8.0e-23 111.3 118 48.3
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 2.6e-21 106.3 80 60.0
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 8.2e-20 101.3 107 50.5
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.9e-17 92.8 70 67.1
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 8.5e-17 91.3 92 46.7
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.3e-14 83.2 46 76.1
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.4e-11 73.9 128 43.8


User provided reference genes

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