Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 3.7e-44 182.6 244 100.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 5.0e-33 145.6 244 89.8
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 9.8e-29 131.3 120 65.0
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.2e-26 124.4 245 84.1
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.3e-25 120.9 145 53.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 8.6e-25 118.2 246 84.1
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 1.9e-24 117.1 125 72.0
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.2e-23 114.4 120 69.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.6e-23 114.0 244 82.0
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.6e-23 114.0 123 68.3
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 2.8e-23 113.2 122 71.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.8e-22 110.5 249 82.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.3e-22 110.2 120 64.2
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 6.8e-22 108.6 122 63.9
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 8.9e-22 108.2 110 72.7
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.2e-21 107.8 121 70.2
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.5e-21 107.5 122 50.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.5e-21 107.5 118 54.2
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.5e-21 107.5 118 65.3
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 2.0e-21 107.1 118 53.4
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.6e-21 106.7 110 70.9
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.4e-21 106.3 125 64.8
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 4.4e-21 105.9 120 70.8
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 4.4e-21 105.9 113 71.7
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 7.5e-21 105.1 120 68.3
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.3e-20 104.4 122 54.1
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.3e-20 104.4 122 50.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 2.2e-20 103.6 125 67.2
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 2.2e-20 103.6 107 66.4
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.7e-20 102.8 124 51.6
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.7e-20 102.8 116 54.3
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 4.9e-20 102.4 121 56.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.1e-19 101.3 110 53.6
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.1e-19 101.3 120 51.7
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 1.1e-19 101.3 120 62.5
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.1e-19 101.3 112 72.3
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.4e-19 100.9 116 52.6
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.4e-19 100.9 120 51.7
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.4e-19 100.9 121 68.6
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.9e-19 100.5 114 65.8
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.9e-19 100.5 122 68.0
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.2e-19 99.8 118 49.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 4.1e-19 99.4 120 69.2
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.1e-19 99.4 249 76.3
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 5.4e-19 99.0 123 62.6
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 7.0e-19 98.6 120 70.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 9.2e-19 98.2 122 63.9
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.2e-18 97.8 118 47.5
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 2.1e-18 97.1 120 51.7
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 2.7e-18 96.7 116 64.7
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 4.6e-18 95.9 111 53.2
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 6.0e-18 95.5 120 68.3
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.0e-17 94.7 112 71.4
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 1.0e-17 94.7 119 68.1
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 1.3e-17 94.4 111 67.6
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.7e-17 94.0 101 50.5
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.7e-17 94.0 101 50.5
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.7e-17 94.0 101 50.5
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.7e-17 94.0 87 65.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 1.7e-17 94.0 123 66.7
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 3.0e-17 93.2 114 71.9
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 3.0e-17 93.2 115 63.5
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 3.9e-17 92.8 116 50.9
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.9e-17 92.8 112 47.3
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 5.1e-17 92.4 121 64.5
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 6.6e-17 92.0 117 66.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 8.6e-17 91.7 102 65.7
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 8.6e-17 91.7 102 65.7
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-16 91.3 87 62.1
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-16 91.3 87 62.1
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.9e-16 90.5 101 67.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.5e-16 90.1 102 64.7
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.5e-16 90.1 109 65.1
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 2.5e-16 90.1 113 61.1
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.3e-16 89.7 87 60.9
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 4.3e-16 89.4 116 64.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 4.3e-16 89.4 83 62.7
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 5.6e-16 89.0 111 69.4
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 9.5e-16 88.2 114 59.6
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 116 50.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.1e-15 87.0 116 62.9
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.8e-15 86.7 104 70.2
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 8.1e-15 85.1 111 64.0
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.8e-14 84.0 100 51.0
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 4.0e-14 82.8 81 58.0
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.0e-14 82.8 104 68.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 8.9e-14 81.6 122 58.2
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.2e-13 81.3 120 60.0
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.2e-13 81.3 101 68.3
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 2.6e-13 80.1 77 59.7
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 2.6e-13 80.1 109 66.1
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 3.4e-13 79.7 66 62.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.4e-13 79.7 101 67.3
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 5.8e-13 79.0 123 52.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 2.2e-12 77.0 96 62.5
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.2e-12 77.0 83 53.0
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 2.2e-12 77.0 81 53.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 8.3e-12 75.1 112 46.4
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.2e-10 71.2 112 40.2
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.6e-10 70.9 87 52.9
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 3.5e-10 69.7 115 41.7
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 3.5e-10 69.7 107 45.8
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.0e-09 68.2 109 63.3
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.3e-09 67.8 69 53.6
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 8.6e-09 65.1 108 39.8
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.5e-08 64.3 72 48.6
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 2.5e-08 63.5 69 52.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 2.8e-07 60.1 68 50.0
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 3.1e-06 56.6 110 33.6
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 8.9e-06 55.1 109 54.1


User provided reference genes

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