Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 7.0e-187 657.1 331 100.0
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 1.0e-158 563.5 330 86.1
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 1.5e-149 533.1 336 83.3
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 1.9e-144 516.2 322 82.3
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.1e-143 512.7 330 79.7
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 2.8e-143 512.3 330 79.7
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.8e-142 509.6 329 79.9
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 8.9e-142 507.3 321 81.3
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 2.0e-141 506.1 320 80.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.3e-140 503.4 318 79.6
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.9e-139 499.6 319 78.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 7.1e-139 497.7 324 78.4
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.1e-138 496.1 323 78.3
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 1.0e-137 493.8 327 78.9
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.7e-137 493.0 323 78.0
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 2.3e-137 492.7 318 77.7
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-137 491.9 324 77.5
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 8.6e-137 490.7 318 76.7
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.9e-136 489.6 324 76.9
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.5e-136 489.2 327 78.6
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.6e-136 488.0 322 77.0
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 5.6e-136 488.0 318 77.4
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 9.6e-136 487.3 322 77.0
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 1.2e-135 486.9 318 77.7
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.6e-135 486.5 327 78.3
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 2.1e-135 486.1 327 78.3
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 2.8e-135 485.7 323 76.2
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 2.8e-135 485.7 318 77.0
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 4.7e-135 485.0 318 76.7
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.1e-134 483.8 324 76.5
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 1.4e-134 483.4 335 72.8
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.8e-134 483.0 329 73.9
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 3.1e-134 482.3 328 74.7
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.0e-134 481.9 324 76.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 5.2e-134 481.5 328 74.7
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 6.8e-134 481.1 329 74.2
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 8.9e-134 480.7 322 76.1
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 8.9e-134 480.7 328 74.7
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 2.0e-133 479.6 321 75.1
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 2.6e-133 479.2 329 73.3
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.4e-133 478.8 330 74.5
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 3.4e-133 478.8 334 74.3
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.8e-133 478.0 330 73.3
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 9.9e-133 477.2 337 73.9
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 2.2e-132 476.1 328 72.9
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 4.9e-132 474.9 323 76.2
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 4.9e-132 474.9 329 72.6
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 6.4e-132 474.6 331 72.2
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.4e-131 472.6 318 75.2
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 2.4e-131 472.6 318 74.8
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 4.2e-131 471.9 319 74.9
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 9.3e-131 470.7 318 75.5
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 2.1e-130 469.5 322 74.5
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 2.7e-130 469.2 329 72.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 4.6e-130 468.4 329 72.6
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 2.3e-129 466.1 334 71.9
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 3.0e-129 465.7 339 72.0
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 3.9e-129 465.3 331 72.8
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 5.1e-129 464.9 333 71.5
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 6.6e-129 464.5 329 72.3
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 6.6e-129 464.5 320 74.4
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 8.7e-129 464.2 338 72.2
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 2.5e-128 462.6 320 73.4
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 2.5e-128 462.6 333 72.1
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 3.3e-128 462.2 329 72.3
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 7.3e-128 461.1 320 75.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 9.6e-128 460.7 329 71.7
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 3.6e-127 458.8 339 70.8
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.8e-126 456.4 319 72.7
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 9.0e-126 454.1 320 72.5
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 9.9e-125 450.7 313 74.4
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 3.2e-123 445.7 312 72.8
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.6e-122 441.8 335 69.0
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 7.9e-122 441.0 317 72.2
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 7.4e-120 434.5 321 71.0
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 1.6e-119 433.3 326 71.5
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 1.5e-117 426.8 331 68.3
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.4e-117 425.6 283 76.3
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 8.4e-116 421.0 320 69.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.4e-115 419.5 309 72.5
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.0e-113 414.1 281 74.7
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 6.2e-111 404.8 321 67.6
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 4.2e-107 392.1 429 52.9
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 3.5e-106 389.0 389 58.1
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.9e-106 387.9 271 75.6
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 5.1e-105 385.2 321 65.7
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 1.6e-103 380.2 323 64.7
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 4.8e-103 378.6 320 63.4
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 7.2e-99 364.8 347 59.1
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.1e-98 363.2 321 61.1
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.7e-98 362.8 347 57.6
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.9e-89 332.4 329 55.3
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.5e-88 330.5 317 55.2
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 2.5e-83 313.2 234 70.5
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.6e-82 310.5 316 52.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 2.6e-80 303.1 205 75.6
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.8e-73 280.4 277 59.9
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 5.9e-69 265.4 293 51.5
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 8.0e-58 228.4 350 42.0
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 1.9e-51 207.2 302 40.7
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.0e-49 199.9 193 60.1
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 4.9e-47 192.6 162 63.6
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 4.6e-45 186.0 181 54.7
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.6e-42 176.4 104 84.6
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 4.7e-42 176.0 123 64.2
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.6e-34 149.8 106 69.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 7.8e-21 105.5 231 34.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 6.0e-13 79.3 50 72.0
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 5.1e-12 76.3 79 55.7
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 3.1e-09 67.0 51 64.7
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 3.2e-06 57.0 78 43.6


User provided reference genes

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