Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.1e-78 296.6 152 100.0
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.2e-70 268.5 151 90.7
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.5e-67 259.6 152 84.2
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 2.5e-67 258.8 152 86.2
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 9.6e-67 256.9 152 84.2
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 1.6e-66 256.1 152 84.2
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.1e-66 255.8 145 89.0
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 8.2e-66 253.8 152 83.6
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 8.2e-66 253.8 152 82.9
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 1.1e-65 253.4 151 84.1
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.8e-65 252.7 152 82.2
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 2.4e-65 252.3 141 90.1
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 5.3e-65 251.1 152 83.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 6.9e-65 250.8 152 82.9
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.5e-64 249.6 152 85.5
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.5e-64 249.6 152 82.2
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 2.0e-64 249.2 152 82.2
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 4.5e-64 248.1 151 82.1
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 4.5e-64 248.1 152 82.9
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 4.5e-64 248.1 152 81.6
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 5.9e-64 247.7 143 84.6
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 7.6e-64 247.3 152 83.6
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 2.9e-63 245.4 145 84.8
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 3.8e-63 245.0 151 81.5
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 6.5e-63 244.2 143 86.7
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 8.5e-63 243.8 152 82.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 8.5e-63 243.8 143 86.0
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 8.5e-63 243.8 148 82.4
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.5e-62 242.3 152 80.9
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 3.2e-62 241.9 143 83.2
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 4.2e-62 241.5 143 82.5
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 4.2e-62 241.5 152 80.3
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 4.2e-62 241.5 145 83.4
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 5.5e-62 241.1 141 85.1
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 5.5e-62 241.1 146 81.5
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 5.5e-62 241.1 141 84.4
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 9.3e-62 240.4 152 78.3
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 1.2e-61 240.0 136 86.8
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 3.6e-61 238.4 161 76.4
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 4.6e-61 238.0 152 79.6
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 4.6e-61 238.0 143 79.7
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 4.6e-61 238.0 143 81.1
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 6.1e-61 237.7 143 81.8
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 6.1e-61 237.7 152 77.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 1.8e-60 236.1 141 81.6
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.3e-60 235.7 143 81.1
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 2.3e-60 235.7 143 81.1
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 5.1e-60 234.6 151 79.5
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 5.1e-60 234.6 143 81.8
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 8.7e-60 233.8 143 80.4
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 4.3e-59 231.5 141 81.6
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 5.7e-59 231.1 141 81.6
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 9.7e-59 230.3 139 82.0
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.6e-58 229.6 146 78.8
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 2.2e-58 229.2 142 81.0
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 2.2e-58 229.2 142 79.6
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.8e-58 228.8 139 80.6
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 3.7e-58 228.4 142 80.3
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 6.3e-58 227.6 142 82.4
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 1.4e-57 226.5 131 87.0
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.2e-56 223.4 152 76.3
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.0e-56 222.6 140 77.9
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.0e-56 222.6 140 77.9
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.0e-56 222.6 153 75.2
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.6e-56 222.2 146 77.4
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 2.2e-55 219.2 143 73.4
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 5.0e-55 218.0 129 86.8
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 6.5e-55 217.6 153 72.5
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.2e-53 213.4 143 73.4
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.7e-53 212.2 137 76.6
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 4.6e-53 211.5 143 76.9
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.8e-52 209.5 130 80.0
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 3.0e-52 208.8 143 72.7
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 6.7e-52 207.6 142 75.4
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 5.7e-51 204.5 153 72.5
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.7e-50 201.8 190 61.6
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 6.3e-50 201.1 140 71.4
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 1.4e-49 199.9 157 66.2
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.4e-49 199.9 152 67.1
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.4e-49 199.1 111 90.1
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.7e-47 193.0 140 70.7
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 9.4e-46 187.2 109 81.7
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 6.1e-45 184.5 110 80.9
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.1e-43 180.3 123 76.4
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.5e-43 179.9 156 61.5
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 4.4e-43 178.3 152 59.9
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 4.8e-42 174.9 141 66.0
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 6.3e-42 174.5 126 71.4
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 1.4e-41 173.3 136 63.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.8e-41 172.9 145 60.0
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.8e-41 172.9 141 62.4
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.8e-41 172.9 141 62.4
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 2.4e-41 172.6 152 58.6
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.4e-41 172.6 143 60.8
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 4.1e-41 171.8 141 61.7
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 5.3e-41 171.4 143 60.1
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 7.0e-41 171.0 143 60.8
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 9.1e-41 170.6 143 60.8
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.2e-40 170.2 145 58.6
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 2.0e-40 169.5 141 61.0
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 4.5e-40 168.3 141 61.0
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 4.5e-40 168.3 141 61.0
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.0e-39 167.2 137 61.3
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 6.5e-39 164.5 116 72.4
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 8.5e-39 164.1 133 62.4
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.5e-38 162.5 137 56.2
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.2e-35 153.7 116 68.1
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 2.6e-35 152.5 107 72.0
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.7e-34 148.7 149 61.1
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.2e-31 139.4 143 53.1
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 5.0e-31 138.3 141 52.5
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 2.7e-29 132.5 77 83.1
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 3.0e-28 129.0 81 77.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-23 113.2 65 80.0
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 4.1e-17 92.0 75 62.7
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 5.4e-17 91.7 153 39.9
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.6e-16 90.1 155 44.5
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.7e-15 86.7 61 67.2
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 1.4e-09 67.0 45 75.6
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 1.6e-08 63.5 138 32.6
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 5.0e-07 58.5 34 82.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 5.0e-07 58.5 34 82.4


User provided reference genes

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