Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.0e-96 356.7 176 100.0
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 2.5e-66 255.8 163 79.1
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 4.7e-65 251.5 163 78.5
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 9.2e-61 237.3 192 66.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 2.3e-56 222.6 170 72.4
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 6.2e-49 198.0 160 66.2
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.9e-46 189.1 164 61.6
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 8.3e-46 187.6 165 64.2
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 1.9e-45 186.4 161 62.7
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.4e-45 186.0 165 59.4
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.7e-44 182.6 159 62.9
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 4.6e-44 181.8 160 63.8
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 6.0e-44 181.4 161 63.4
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 7.8e-44 181.0 160 61.9
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.3e-43 180.3 160 61.9
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 1.1e-42 177.2 160 62.5
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.5e-42 176.8 162 61.7
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.5e-42 176.8 160 61.2
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.9e-42 176.4 162 61.7
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 1.9e-42 176.4 160 61.9
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.3e-42 175.6 160 55.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.3e-42 175.3 161 56.5
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 5.6e-42 174.9 166 56.0
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 7.3e-42 174.5 161 57.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 2.1e-41 172.9 159 59.7
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.1e-41 172.9 165 58.8
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 2.8e-41 172.6 161 59.0
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 3.6e-41 172.2 159 59.1
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.7e-41 171.8 160 59.4
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 1.8e-40 169.9 162 56.2
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 2.3e-40 169.5 161 58.4
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 2.3e-40 169.5 160 58.8
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.3e-40 169.5 160 58.1
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 3.1e-40 169.1 161 56.5
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 4.0e-40 168.7 161 59.0
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 8.9e-40 167.5 165 57.6
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 8.9e-40 167.5 164 57.3
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.2e-39 167.2 165 57.0
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.5e-39 166.8 165 57.6
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 2.6e-39 166.0 161 59.0
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 3.4e-39 165.6 162 54.9
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 3.4e-39 165.6 162 54.9
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 4.4e-39 165.2 163 54.0
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 4.4e-39 165.2 160 58.8
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 9.9e-39 164.1 161 58.4
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 9.9e-39 164.1 166 58.4
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 9.9e-39 164.1 160 58.1
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 3.7e-38 162.2 160 56.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 4.9e-38 161.8 163 56.4
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 3.2e-37 159.1 163 54.6
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 5.4e-37 158.3 176 51.7
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 7.1e-37 157.9 168 55.4
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.2e-36 157.1 160 53.1
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 1.6e-36 156.8 161 54.7
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 2.1e-36 156.4 108 70.4
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.0e-35 154.1 162 53.7
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 1.3e-35 153.7 160 56.9
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.3e-35 152.9 113 67.3
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 8.6e-35 151.0 161 52.2
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.5e-34 149.4 165 53.3
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.3e-34 149.1 160 53.1
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.3e-34 148.7 107 69.2
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 7.3e-34 147.9 160 52.5
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.6e-33 146.7 166 50.0
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 3.6e-33 145.6 160 52.5
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.1e-33 144.4 122 59.0
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.1e-32 144.1 164 53.0
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.4e-32 143.7 170 50.6
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.4e-32 143.7 164 53.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.4e-32 143.7 165 52.1
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.8e-32 143.3 161 51.6
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 4.0e-32 142.1 108 65.7
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 6.8e-32 141.4 161 53.4
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 8.9e-32 141.0 167 49.7
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.5e-31 140.2 162 51.9
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 2.0e-31 139.8 162 51.9
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 3.4e-31 139.0 161 50.3
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 3.4e-31 139.0 161 50.3
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.4e-29 133.7 159 48.4
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.9e-29 133.3 160 50.0
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 7.1e-29 131.3 160 47.5
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 3.5e-28 129.0 162 48.1
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.7e-27 126.7 167 46.1
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.1e-26 124.0 167 46.1
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 4.3e-26 122.1 159 44.0
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 9.6e-26 120.9 161 47.8
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 9.6e-26 120.9 163 44.2
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.6e-25 120.2 167 44.9
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 2.8e-25 119.4 138 50.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.7e-25 118.6 215 41.4
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 5.2e-24 115.2 108 54.6
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 5.2e-24 115.2 169 43.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 9.0e-24 114.4 160 43.1
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 2.0e-23 113.2 160 41.2
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.6e-23 112.8 163 46.0
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.4e-21 107.1 124 49.2
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 7.1e-21 104.8 164 41.5
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.7e-20 102.8 119 50.4
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.9e-19 99.0 132 45.5
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.2e-12 77.4 90 48.9
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 2.1e-12 76.6 84 51.2
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 2.5e-10 69.7 69 56.5


User provided reference genes

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