Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.7e-168 595.9 299 100.0
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 6.4e-123 444.5 306 77.1
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.0e-120 437.2 298 75.8
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.1e-117 427.2 298 75.8
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 9.0e-117 424.1 298 72.5
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 3.2e-114 415.6 300 71.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 5.4e-114 414.8 297 70.4
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 2.7e-113 412.5 287 74.2
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.0e-112 410.6 288 72.6
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.8e-112 409.8 291 71.8
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 7.4e-111 404.4 287 71.4
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 9.6e-111 404.1 292 71.2
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.6e-110 403.3 299 71.6
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 6.2e-110 401.4 288 72.6
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 8.1e-110 401.0 301 70.8
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 8.1e-110 401.0 298 68.8
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 1.4e-109 400.2 277 74.4
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.8e-109 399.8 295 70.2
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.1e-109 399.1 287 70.7
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 3.1e-109 399.1 298 71.1
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 5.3e-109 398.3 286 71.3
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 6.9e-109 397.9 288 69.8
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.2e-108 397.1 241 82.2
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 4.5e-108 395.2 286 71.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 7.6e-108 394.4 272 72.4
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.3e-107 393.7 298 68.8
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.7e-107 393.3 241 80.9
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.7e-107 393.3 249 78.3
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.2e-107 392.9 258 74.8
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.4e-107 391.3 294 70.7
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 6.4e-107 391.3 286 71.7
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 8.4e-107 391.0 289 69.6
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 1.1e-106 390.6 274 72.6
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-106 390.2 259 76.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.9e-106 389.8 294 70.7
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.4e-106 389.4 302 67.2
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 3.2e-106 389.0 277 69.7
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 4.2e-106 388.7 243 78.2
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 9.3e-106 387.5 260 75.8
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 2.7e-105 386.0 295 69.5
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 3.5e-105 385.6 297 68.4
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 6.0e-105 384.8 273 72.5
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.3e-104 383.6 287 69.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 2.3e-104 382.9 259 73.0
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 3.9e-104 382.1 306 65.7
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 6.7e-104 381.3 292 69.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-103 380.6 303 65.7
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 2.5e-103 379.4 299 66.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 2.5e-103 379.4 249 74.3
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.3e-103 379.0 293 68.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.3e-103 379.0 292 69.5
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 7.4e-103 377.9 267 71.5
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 3.7e-102 375.6 264 72.3
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 3.7e-102 375.6 264 72.3
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 8.2e-102 374.4 275 68.7
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.4e-101 373.6 296 67.6
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.2e-100 370.5 274 70.8
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.0e-100 369.8 288 66.7
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.0e-100 369.8 307 63.2
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 4.5e-100 368.6 300 64.7
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 5.8e-100 368.2 317 62.8
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 7.6e-100 367.9 287 64.5
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.0e-99 367.5 299 65.9
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 1.7e-99 366.7 278 68.7
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.2e-99 366.3 278 64.7
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.9e-99 365.9 238 77.7
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 3.8e-99 365.5 281 67.3
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 3.2e-98 362.5 286 65.7
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 5.5e-98 361.7 276 66.3
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.6e-97 358.6 286 67.1
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 3.9e-96 355.5 275 67.3
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 3.3e-95 352.4 281 66.2
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 4.3e-95 352.1 276 67.0
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.3e-94 350.5 287 67.6
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 6.3e-94 348.2 291 63.2
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.4e-93 346.3 241 71.0
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 3.1e-93 345.9 253 70.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.0e-92 343.2 305 61.6
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.6e-92 342.8 291 62.2
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 2.6e-92 342.8 199 85.4
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 2.5e-90 336.3 240 72.5
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 3.2e-90 335.9 260 67.3
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 7.2e-90 334.7 254 67.3
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.6e-89 333.6 272 64.7
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 7.4e-87 324.7 224 71.9
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.8e-86 322.8 225 71.1
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 3.4e-84 315.8 247 67.6
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 5.9e-84 315.1 258 61.2
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 5.9e-84 315.1 286 59.8
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.4e-80 303.9 239 64.0
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 3.0e-80 302.8 236 64.8
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 9.7e-79 297.7 220 69.5
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 1.3e-78 297.4 250 59.6
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.2e-76 290.8 243 64.6
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.2e-74 282.3 287 55.4
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 7.0e-69 265.0 186 69.4
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.0e-64 251.1 294 51.7
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 8.2e-62 241.5 239 53.1
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.4e-61 240.0 252 52.0
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.5e-55 220.7 233 47.2
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.6e-49 200.7 142 68.3
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 2.3e-43 180.3 237 43.0
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 4.7e-41 172.6 233 38.2
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.4e-40 171.0 244 44.3
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.3e-35 154.5 251 35.9
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.0e-31 140.6 136 57.4
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.3e-30 137.9 101 66.3
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.8e-24 117.5 85 62.4
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.1e-20 104.0 108 50.9
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 9.5e-18 95.1 103 54.4
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.8e-16 90.9 89 56.2
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 8.9e-16 88.6 55 74.5
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 6.4e-14 82.4 62 64.5
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.5e-10 70.5 54 63.0
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 7.3e-10 68.9 70 52.9
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 7.3e-10 68.9 70 52.9
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.1e-09 67.4 70 51.4
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.0e-07 60.8 53 49.1


User provided reference genes

Program Settings