Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.2e-91 339.0 171 100.0
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 5.4e-50 201.4 171 66.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.7e-49 199.1 168 66.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 3.5e-49 198.7 165 67.3
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 4.6e-49 198.4 172 66.3
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 4.0e-45 185.3 167 63.5
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 7.6e-44 181.0 167 58.7
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 1.7e-43 179.9 161 61.5
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 8.4e-43 177.6 146 65.8
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 8.4e-43 177.6 120 70.0
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.1e-42 177.2 128 67.2
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.4e-42 176.8 154 63.6
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 4.2e-42 175.3 169 56.8
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 5.4e-42 174.9 130 67.7
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.1e-42 174.5 171 55.6
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 9.3e-42 174.1 144 65.3
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.6e-41 173.3 137 66.4
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.1e-41 172.9 173 54.9
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 2.1e-41 172.9 174 56.9
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 2.7e-41 172.6 115 77.4
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 4.6e-41 171.8 154 64.3
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.7e-40 169.9 128 65.6
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.3e-40 169.5 119 68.9
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 3.0e-40 169.1 126 67.5
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.9e-40 168.7 130 65.4
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 5.1e-40 168.3 169 56.8
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.9e-39 166.4 163 55.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 7.3e-39 164.5 175 57.1
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 7.3e-39 164.5 119 68.1
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 9.6e-39 164.1 112 72.3
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.3e-38 163.7 150 62.0
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.3e-38 163.7 119 67.2
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 3.6e-38 162.2 130 63.8
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.6e-38 162.2 161 56.5
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 6.2e-38 161.4 119 68.1
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 6.2e-38 161.4 161 56.5
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 8.1e-38 161.0 163 55.2
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 2.4e-37 159.5 117 70.9
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.4e-37 159.5 119 67.2
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.4e-37 159.5 158 58.9
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 2.4e-37 159.5 96 77.1
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 3.1e-37 159.1 130 63.8
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 4.0e-37 158.7 134 64.2
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.5e-36 156.8 125 65.6
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.5e-36 156.8 116 69.0
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.6e-36 156.0 118 67.8
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 5.8e-36 154.8 170 50.0
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 7.6e-36 154.5 175 56.6
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 7.6e-36 154.5 157 54.1
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 9.9e-36 154.1 164 54.3
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 6.4e-35 151.4 118 63.6
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 8.4e-35 151.0 126 60.3
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 8.4e-35 151.0 118 65.3
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 8.4e-35 151.0 116 69.0
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.4e-34 150.2 119 64.7
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 2.4e-34 149.4 156 53.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.4e-34 149.4 183 48.1
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 4.2e-34 148.7 117 65.8
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 5.4e-34 148.3 117 65.8
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 5.4e-34 148.3 117 65.8
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 5.4e-34 148.3 117 65.8
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 5.4e-34 148.3 117 65.8
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.2e-33 147.1 171 53.8
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 2.7e-33 146.0 120 65.8
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 2.7e-33 146.0 119 64.7
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 4.6e-33 145.2 163 53.4
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 7.8e-33 144.4 120 62.5
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.3e-32 143.7 116 55.2
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.7e-32 143.3 172 46.5
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 6.6e-32 141.4 134 54.5
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.1e-31 140.6 117 62.4
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 4.3e-31 138.7 142 52.1
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 5.6e-31 138.3 127 55.9
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 9.6e-31 137.5 91 74.7
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 8.1e-30 134.4 91 73.6
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.1e-29 134.0 87 74.7
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 2.4e-29 132.9 87 73.6
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 5.3e-29 131.7 96 69.8
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 3.4e-28 129.0 87 71.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.4e-26 122.9 90 66.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 5.4e-26 121.7 77 77.9
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 7.1e-26 121.3 96 57.3
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 2.5e-23 112.8 118 58.5
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 4.3e-23 112.1 93 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 2.9e-19 99.4 87 54.0
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.8e-19 99.0 71 67.6
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.7e-17 92.8 109 47.7
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 6.0e-17 91.7 116 46.6
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 5.7e-15 85.1 106 50.0
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 6.9e-13 78.2 95 49.5
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.2e-11 73.2 66 62.1
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.2e-11 73.2 66 62.1
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 3.8e-11 72.4 103 50.5
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 1.0e-08 64.3 84 42.9
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.8e-08 63.5 46 73.9
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 2.8e-06 56.2 71 46.5


User provided reference genes

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