Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 0.0e+00 1630.5 862 100.0
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1310.0 862 80.3
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 0.0e+00 1283.5 920 75.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 0.0e+00 1132.5 870 71.8
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 0.0e+00 1112.4 865 70.2
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 0.0e+00 1104.7 867 69.6
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 0.0e+00 1098.6 856 69.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 0.0e+00 1090.5 780 72.9
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 0.0e+00 1088.2 860 68.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 5.9e-312 1074.3 866 67.6
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 8.8e-311 1070.1 868 67.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.2e-310 1069.7 835 68.6
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 4.5e-310 1067.8 865 66.9
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.2e-308 1061.6 813 69.4
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.3e-305 1051.2 866 66.2
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.8e-303 1045.8 812 69.1
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 5.3e-303 1044.3 792 69.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 2.0e-302 1042.3 865 66.0
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.7e-301 1039.3 786 70.4
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.6e-299 1032.7 772 71.2
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 7.9e-299 1030.4 896 64.4
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 5.1e-298 1027.7 869 65.7
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.1e-297 1026.5 804 69.3
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.1e-297 1026.5 748 71.5
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.5e-297 1026.2 873 65.4
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 4.1e-295 1018.1 804 68.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 5.0e-293 1011.1 799 69.3
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.5e-292 1008.8 837 66.8
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.5e-289 998.8 856 64.0
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 3.4e-286 988.4 802 66.5
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 5.0e-285 984.6 813 66.5
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 5.5e-284 981.1 776 66.9
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 4.6e-283 978.0 773 68.2
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.8e-282 976.1 793 66.2
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 3.9e-282 974.9 860 62.7
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 2.6e-281 972.2 812 65.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 4.1e-279 964.9 716 71.2
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 6.1e-275 951.0 827 62.5
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.0e-274 948.7 823 63.3
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 3.5e-270 935.3 804 63.8
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 5.0e-269 931.4 806 63.9
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.9e-268 929.5 794 63.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.5e-268 929.1 802 63.6
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.2e-267 926.8 830 62.5
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 3.6e-267 925.2 805 63.1
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 8.0e-267 924.1 794 63.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.4e-266 923.3 813 63.6
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.8e-266 922.9 797 63.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 3.7e-264 915.2 855 59.8
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 7.0e-263 911.0 838 61.0
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 3.5e-262 908.7 833 60.5
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.2e-261 906.0 804 63.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 2.5e-260 902.5 829 60.6
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 9.4e-260 900.6 827 60.9
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 1.6e-259 899.8 754 65.9
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.6e-257 892.5 825 59.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 3.4e-257 892.1 830 60.4
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 5.7e-257 891.3 827 60.2
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 9.8e-257 890.6 825 59.2
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.3e-256 890.2 860 56.7
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.3e-256 890.2 828 59.3
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.1e-255 887.1 826 59.4
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 4.1e-255 885.2 804 60.8
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 5.4e-255 884.8 798 61.5
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.0e-255 884.4 793 61.8
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.7e-254 882.5 824 57.8
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.0e-253 880.6 789 59.2
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.7e-253 879.8 821 59.6
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.1e-252 877.1 783 60.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.9e-252 876.3 793 61.5
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 7.2e-252 874.4 832 59.5
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 9.5e-252 874.0 870 58.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 2.3e-250 869.4 907 57.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 6.8e-250 867.8 755 62.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 6.3e-248 861.3 764 61.9
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.0e-245 854.0 700 66.6
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 4.7e-243 845.1 835 56.4
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 5.2e-242 841.6 813 58.7
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.2e-242 841.6 840 55.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 2.6e-241 839.3 754 61.1
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 9.2e-231 804.3 779 57.9
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 3.6e-227 792.3 790 56.1
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 3.6e-211 739.2 589 68.3
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.8e-210 736.9 732 55.3
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 4.9e-208 728.8 795 51.6
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 5.3e-202 708.8 780 49.2
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 4.5e-201 705.7 797 50.7
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.8e-195 686.4 490 72.9
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.1e-194 682.9 871 49.9
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 3.5e-190 669.5 593 63.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.6e-185 653.3 589 61.5
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 4.2e-183 646.0 578 61.8
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-182 644.4 807 47.0
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.3e-181 641.0 779 49.8
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.5e-177 625.9 570 61.4
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.6e-174 617.5 506 64.8
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 8.7e-173 611.7 633 55.8
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.4e-165 587.8 587 57.6
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.8e-157 560.8 554 56.5
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 7.0e-154 548.9 549 55.9
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 6.1e-134 482.6 864 40.6
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 9.8e-124 448.7 885 34.4
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.2e-106 390.6 808 35.5
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.2e-97 362.1 274 70.4
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 2.3e-88 331.3 366 47.3
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-83 315.5 255 65.1
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-80 305.4 267 62.9
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 4.3e-79 300.4 620 33.4
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.9e-74 285.0 205 72.2
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 1.0e-72 279.3 867 30.3
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.4e-68 264.2 260 58.5
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.9e-66 258.5 215 58.1
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 8.8e-56 223.0 877 25.3
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 5.9e-28 130.6 152 50.0
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 2.8e-22 111.7 145 45.5
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.8e-17 95.1 105 55.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 4.0e-16 91.3 95 55.8
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 2.0e-15 89.0 68 66.2
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 5.4e-13 80.9 142 38.7
Oeu059233.1 Olea europaea HOM05D001356 ORTHO05D003895 4.9e-06 57.8 204 26.0


User provided reference genes

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